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lakhujanivijay/README.md

👋 Hey!

Hi there! I'm Vijay Lakhujani, a passionate Clinical Bioinformatics Lead with over 13 years of experience in bioinformatics and genomics. This is my personal space where I explore innovative ideas, develop solutions, and share insights into this fascinating field.

🧬 About Me

As an experienced Clinical Bioinformatics Lead, I bring a deep understanding of clinical NGS software development and a passion for software engineering and bioinformatics. Over the years, I've led innovative projects that have streamlined data analysis and interpretation for clinical applications.

Here’s what I bring to the table:

  • 🔬 Clinical Bioinformatics Expertise: Specializing in NGS and high-throughput analysis.
  • 🖥️ Core Skills: Python, HPC, MongoDB, AWS, Git, Bash, and Container Systems.
  • 🚀 Leadership: Managing and mentoring Python Developers and Bioinformaticians.
  • 📋 Project Management: Proficient in Jira and Scrum, ensuring on-time, within-budget delivery.
  • 🛠️ Innovation: Solving complex data challenges with creative, scalable solutions.

💼 Professional Space

This is my personal GitHub account, where I showcase experimental projects, prototypes, and open-source contributions. My professional github account is hosted here ➡️ BaseSolve Official GitHub, however, I work privately there ! No public repos; ofcourse.


🔧 Core Skill Sets

  • Clinical Bioinformatics (NGS)
  • Python & Python-based workflow development
  • High-Performance Computing (HPC)
  • MongoDB
  • Shell Scripting (Bash)
  • Containerization (Docker, Singularity)
  • Version Control: Git and GitHub

🌱 My Mission

  • Developing AUGMET, a cutting-edge Genomics Software Suite that powers precision medicine.
  • Empowering teams to tackle challenges in clinical genomics with innovation and technical excellence.
  • Staying ahead in bioinformatics by embracing the latest advancements in technology and research.

🤝 How Can I Help You?

I’m passionate about sharing my knowledge and helping others excel in the field of bioinformatics. Here are some ways I can assist you:

  • Bioinformatics Q&A: Have questions? I’m here to help with solutions and guidance.
  • Webinars & Workshops: Let’s learn together! I conduct sessions on bioinformatics and genomics.
  • Student Career Counseling: Need advice on career paths in bioinformatics? I’ve got you covered.
  • Resume Building: Learn how to craft the perfect bioinformatics resume to land your dream job.
  • Interview Tips & Tricks: Ace your interviews with confidence and preparation.

Feel free to reach out to discuss collaborations, questions, or anything bioinformatics-related. You can schedule a 1:1 session with me; see details below


🌐 Let’s Connect!


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  1. Bioinformatics-Problems-Rosalind Public

    💻 Small coding assignments from Rosalind and some day-to-day fun coding and learning activities.

    Python 8 5

  2. Xcelris-Labs-Ltd/Publication-ready-taxonomic-charts-from-QIIME Public

    Ultra fast program to generate publication ready taxonomic pie charts from QIIME.

    Python 5 3

  3. Fun-with-Linux Public

    :trollface: When I am (!=working), I am (SUDO working) ! Exploiting Linux for some non-bioinfo activities :D

    Shell

  4. Awesome-One-Liners Public

    🚀 Ditch coding! Get it done in a line! This repository consists of quick one liners in shell to manipulate NGS data.

    9 1

  5. Setup birthday notifications on PC
    1
    # Setup birthday notifications on PC
    2
    
                  
    3
    It's a fun script that I wrote to set up birthday notifications on my friend's PC. The notification appeared on her PC after an interval of 3 seconds as shown below:
    4
    
                  
    5
    ![alt text](https://raw.githubusercontent.com/lakhujanivijay/Fun_with_Linux/master/Command_line_bday_pop_ups/popup_screenshot.png "pop-ups")
  6. Playing-with-tabular-data Public

    🏂 A small tutorial on manipulating tabular data using csvtk

    Python 1

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Loading A graph representing lakhujanivijay's contributions from February 11, 2024 to February 16, 2025. The contributions are 100% commits, 0% issues, 0% pull requests, 0% code review.   Code review   Issues   Pull requests 100% Commits

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February 2025

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