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Plip #11

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Plip #11

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Commits on Oct 12, 2022

  1. remove old data files

    @dlemas
    dlemas committed Oct 12, 2022
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  2. add PPDbench files

    @dlemas
    dlemas committed Oct 12, 2022
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  3. ppdbench update

    @dlemas
    dlemas committed Oct 12, 2022
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  4. update pdb_metadata

    @dlemas
    dlemas committed Oct 12, 2022
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  5. add plip results

    @dlemas
    dlemas committed Oct 12, 2022
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  6. update demo-data

    @dlemas
    dlemas committed Oct 12, 2022
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  7. rename step1_0.py

    @dlemas
    dlemas committed Oct 12, 2022
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  8. rename step1_2.rmd

    @dlemas
    dlemas committed Oct 12, 2022
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Commits on Oct 13, 2022

  1. update step1

    @dlemas
    dlemas committed Oct 13, 2022
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  2. Create ppdbench_format.txt

    @dlemas
    dlemas committed Oct 13, 2022
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  3. remove files that are not required

    @dlemas
    dlemas committed Oct 13, 2022
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Commits on Oct 18, 2022

  1. metadata updated w/ sequences

    @evanhadam
    evanhadam committed Oct 18, 2022
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  2. pdb_lookup

    @evanhadam
    evanhadam committed Oct 18, 2022
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  3. rename to pdb_to_sequence

    @evanhadam
    evanhadam committed Oct 18, 2022
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Commits on Oct 21, 2022

  1. fixed ppdbench_metadata.csv to contain peptide sequences, next step i… 

    …s to manually enter uniprot ids
    @AnthonyYao7
    AnthonyYao7 committed Oct 21, 2022
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Commits on Oct 24, 2022

  1. Updated to include failed 4dcb. No such 4dcb pdb file

    @AnthonyYao7
    AnthonyYao7 authored Oct 24, 2022
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Commits on Oct 25, 2022

  1. fixed plip file names

    @AnthonyYao7
    AnthonyYao7 committed Oct 25, 2022
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  2. fixed merge conflict

    @AnthonyYao7
    AnthonyYao7 committed Oct 25, 2022
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Commits on Oct 27, 2022

  1. step 1 fully working

    @AnthonyYao7
    AnthonyYao7 committed Oct 27, 2022
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