Make test pass (v0.3.4) #32
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| # Workflow derived from https://github.com/r-lib/actions/blob/v2-branch/examples/check-standard.yaml | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| branches: [main, master] | |
| workflow_dispatch: | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macos-latest, r: 'release'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel-1'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| # JAGS install. Inspired by https://github.com/boydorr/SpARKjags/blob/master/.github/workflows/test-build.yaml | |
| # but updated with ignoring certificates and redirects. | |
| # JAGS is automatically installed on linux via the rjags package. | |
| - name: Install JAGS (if Windows) | |
| if: runner.os == 'Windows' | |
| run: | | |
| curl.exe -o wjags.exe -L0 -k --url https://deac-fra.dl.sourceforge.net/project/mcmc-jags/JAGS/4.x/Windows/JAGS-4.3.1.exe | |
| wjags.exe /S | |
| del wjags.exe | |
| shell: cmd | |
| - name: Install JAGS (if macOS) | |
| if: runner.os == 'macOS' | |
| # This worked before R 4.3: brew install jags | |
| run: | | |
| curl -o wjags.pkg -L0 -k --url https://downloads.sourceforge.net/project/mcmc-jags/JAGS/4.x/Mac%20OS%20X/JAGS-4.3.2.pkg | |
| installer -pkg wjags.pkg | |
| rm wjags.pkg | |
| # R | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck, any::covr | |
| needs: check, coverage | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |
| # Run test coverage on the fastest-to-run job | |
| - name: Test coverage | |
| if: matrix.config.os == 'macos-latest' && matrix.config.r == 'release' | |
| run: | | |
| covr::codecov( | |
| quiet = FALSE, | |
| clean = FALSE, | |
| install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package") | |
| ) | |
| shell: Rscript {0} |