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Update packaging for modern python, fix failing tests #85

Update packaging for modern python, fix failing tests

Update packaging for modern python, fix failing tests #85

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python package
on:
push:
branches:
- '*'
pull_request:
branches:
- 'master'
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
steps:
- uses: actions/checkout@v4
- name: Set up Python "${{ matrix.python-version }}"
uses: actions/setup-python@v5
with:
python-version: "${{ matrix.python-version }}"
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install .
- name: Lint with flake8
run: |
pip install flake8
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
pip install pytest pytest-cov
pytest --doctest-modules --junitxml=junit/test-results.xml --cov=lofarimaging --cov-report=xml --cov-report=html
- name: Upload to Codecov
uses: codecov/[email protected]
with:
file: coverage.xml
fail_ci_if_error: false
- name: Test notebook
run: |
pip install nbconvert jupyter_client ipykernel
python -m ipykernel install --user
jupyter nbconvert --to html --execute lofarimaging.ipynb