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fix cscope.out.files generation for windows#355

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rsinghgit wants to merge 3 commits intoludovicchabant:masterfrom
rsinghgit:master
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fix cscope.out.files generation for windows#355
rsinghgit wants to merge 3 commits intoludovicchabant:masterfrom
rsinghgit:master

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  1. Change from write to (>) to append (>>) operation when updating the cscope.out.files
  2. Add a "." prefix if %PROJECT_ROOT% is ""

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