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update readme
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fromseto committed Dec 19, 2017
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12 changes: 6 additions & 6 deletions README.md
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# MinimalGenome
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### This is a public repo for Wang, L., Maranas, C.D. (2017), MinGenome: An in silico top-down approach for the synthesis of minimized genomes. ACS Synthetic Biology, DOI: 10.1021/acssynbio.7b00296
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The main functions are in codebase folder
the main function is "mingenome_prototype.py" which reads compiles data file and call MinGenome algorithm

## This is a public repo for Wang, L., Maranas, C.D. (2017), MinGenome: An in silico top-down approach for the synthesis of minimized genomes. ACS Synthetic Biology, accepted

## MinGenome is written in python and the iteration is using a cpp code to call cplex solver directly.

### The main functions are in codebase folder
### the main function is "mingenome_prototype.py" which reads compiles data file and call MinGenome algorithm
![MinGenome workflow](MinGenome.png)

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