- Updates the
blastdbcmd
to use the-outfmt
flag which outputs only the fields of interest and doesn't require any FASTA parsing - Fixes a bug in the calculation of sensitivity and specificity
To install from source, download the attached source tarball and run, e.g.
$ gunzip < chipper-0.2.1.tar.gz | tar -xvf -
$ cd chipper-0.2.1
$ mkdir build
$ cd build
$ cmake ..
$ make all test install
There is also an attached binary distribution for Darwin
which has already been built for you as well as all the input and generated data from the jupyter notebook.