GitHub - matthewhickey98/PhragmoplastSimulator: A tool to simulate microtubule dynamics in the phragmoplast

matthewhickey98 / PhragmoplastSimulator Public

Notifications You must be signed in to change notification settings
Fork 0
Star 0

A tool to simulate microtubule dynamics in the phragmoplast

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
MatlabCode		MatlabCode
.gitignore		.gitignore
Bitmap.cpp		Bitmap.cpp
Bitmap.hpp		Bitmap.hpp
FrameName.cpp		FrameName.cpp
FrameName.hpp		FrameName.hpp
LICENSE		LICENSE
Microtubule.cpp		Microtubule.cpp
Microtubule.hpp		Microtubule.hpp
Phragmoplast.cpp		Phragmoplast.cpp
Phragmoplast.hpp		Phragmoplast.hpp
README		README
RandomGen.cpp		RandomGen.cpp
RandomGen.hpp		RandomGen.hpp
makefile		makefile
php_const.hpp		php_const.hpp
php_mkfig_3s.cpp		php_mkfig_3s.cpp
php_simulator_3s.cpp		php_simulator_3s.cpp
readpars.cpp		readpars.cpp
readpars.hpp		readpars.hpp

Repository files navigation

This application simulates microtubule (MT) dynamics within the phragmoplast of a plant cell. Various parameters that control the simulation, the microtubule dynamics, and microtubule nucleation can be used. 
Table 1 describes the parameters used in the simulation.
The simulator can be used in two ways: via the Graphical User Interface (GUI) or via command- line operation. Both methods are described below. The GUI allows for automatic data processing and analysis. It produces images, plots, and turnover values for each simulation. The command-line interface only produces raw data outputs that must be manually analyzed.

MICROTUBULE NUCLEATING FACTOR MACERATOR TETHERS AUGMIN7 TO MICROTUBULES AND GOVERNS PHRAGMOPLAST ARCHITECTURE
Sharol Schmidt-Marcec, Alyssa Parish, Tetyana Smertenko, Matthew Hickey, Bernard M.A.G. Piette, Andrei Smertenko
DOI: