Welcome to the publication resources repository of the Mass Spectrometry Facility at the Max Perutz Labs. This repository is dedicated to storing the source code for our scientific manuscripts. Each manuscript has its own folder, which contains all the relevant source code files.
A Causal Model of Ion Interference Enables Assessment and Correction of Ratio Compression in Multiplex Proteomics
Moritz Madern, Wolfgang Reiter, Florian Stanek, Natascha Hartl, Karl Mechtler, Markus Hartl
Source files: 2023_madern_isobaric-tag-interference-modeling
Published in Molecular and Cellular Proteomics (December 12, 2023)
DOI: 10.1016/j.mcpro.2023.100694
Chemical Acetylation of Ligands and Two-Step Digestion Protocol for Reducing Codigestion in Affinity Purification–Mass Spectrometry
David M. Hollenstein, Margarita Maurer-Granofszky, Wolfgang Reiter, Dorothea Anrather, Thomas Gossenreiter, Riccardo Babic, Natascha Hartl, Claudine Kraft, Markus Hartl
Source files: 2023_hollenstein_chemical-ligand-acetylation
Published in Journal of Proteome Research (September 15, 2023)
DOI: 10.1021/acs.jproteome.3c00424
If you have any questions or inquiries regarding this repository, please feel free to reach out to Markus Hartl at the Mass Spectrometry Facility of the Max Perutz Labs.