Add HL7 v2 narrative extraction with source provenance#1776
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maziyarpanahi wants to merge 1 commit into
Open
Add HL7 v2 narrative extraction with source provenance#1776maziyarpanahi wants to merge 1 commit into
maziyarpanahi wants to merge 1 commit into
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Description
Adds de-identified narrative extraction for common HL7 v2 ADT, ORU, and ORM messages. The extractor reuses the existing segment-aware parser and structured redactor, renders stable flat or sectioned text, passes the complete narrative through the privacy pipeline, and preserves final-text offsets back to source segment occurrences and fields.
Type of Change
Changes Made
extract_hl7v2_narrativewith deterministic flat and sectioned modes for common message, patient, encounter, order, observation, result, and note fields.Testing
Validation completed:
.venv/bin/python -m pytest tests/ -q— 5,205 passed, 46 skippedmake formatmake lintmake format-checkmake type-checkmake docs-buildDocumentation
A changelog update is not needed for this focused roadmap feature PR.
Code Quality
make format,make lint, andmake format-checkmake format-swiftandmake lint-swiftNo Swift/OpenMedKit files are changed.
Dependencies
Checklist
Related Issues
Closes #861
Screenshots/Examples
Not applicable. This change adds a Python interoperability API, offset provenance contract, tests, and documentation without a UI surface.