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  1. cellblender cellblender Public

    Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models

    Python 63 13

  2. mcell mcell Public

    MCell Monte Carlo Simulator of Cellular Microphysiology

    C++ 35 11

  3. swc_mesher swc_mesher Public

    Creates a Blender Object from an SWC formatted file

    Python 10 7

  4. gamer-v1 gamer-v1 Public

    Geometry-preserving Adaptive Mesh Generator

    C++ 8 6

  5. neuron_launcher neuron_launcher Public

    Set of tools in Blender to create models for MCell/Neuron hybrid simulations

    C++ 7 2

  6. mesh_tools mesh_tools Public

    A collection of tools for processing and analyzing surface meshes for use with MCell/CellBlender

    Forth 6 1

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Showing 10 of 39 repositories
  • gamer Public Forked from ctlee/gamer

    Geometry-preserving Adaptive Mesher

    mcellteam/gamer’s past year of commit activity
    C++ 0 11 0 0 Updated Mar 11, 2025
  • mesh_tools Public

    A collection of tools for processing and analyzing surface meshes for use with MCell/CellBlender

    mcellteam/mesh_tools’s past year of commit activity
    Forth 6 1 0 0 Updated Mar 11, 2025
  • neuropil_tools Public

    Blender addon to automate annotation and analysis of dendritic spines and axons in neuropil. Requires installation of CellBlender.

    mcellteam/neuropil_tools’s past year of commit activity
    Python 3 1 9 0 Updated Mar 11, 2025
  • mcell_tools Public

    Package build repository

    mcellteam/mcell_tools’s past year of commit activity
    Python 2 0 0 0 Updated Feb 28, 2025
  • mcell Public

    MCell Monte Carlo Simulator of Cellular Microphysiology

    mcellteam/mcell’s past year of commit activity
    C++ 35 11 10 4 Updated Feb 26, 2025
  • cellblender Public

    Create, Simulate, Visualize, and Analyze Realistic 3D Cell Models

    mcellteam/cellblender’s past year of commit activity
    Python 63 GPL-2.0 13 35 2 Updated Feb 26, 2025
  • libbng Public

    BioNetGen library

    mcellteam/libbng’s past year of commit activity
    C++ 1 1 0 0 Updated Feb 26, 2025
  • VTK Public Forked from Kitware/VTK

    Mirror of Visualization Toolkit repository

    mcellteam/VTK’s past year of commit activity
    C++ 0 1,238 0 0 Updated Feb 24, 2025
  • ultramicrotome Public

    Blender/Python tool for simulating an ultramicrotome for 3DEM analysis

    mcellteam/ultramicrotome’s past year of commit activity
    0 GPL-2.0 0 0 0 Updated Feb 14, 2025
  • swift-ir Public

    SWiFT-IR: Signal Whitening Fourier Transform Image Registration

    mcellteam/swift-ir’s past year of commit activity
    Python 4 0 2 0 Updated Jan 10, 2025

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