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seki-birds

Interpreting acoustic data for bird activity and diversity in Sequoia-Kings Canyon National Park (SEKI)

project description:

in progress...

data:

/indices/2018_02_05: csv files of acoustic indices calculated for all lakes 2014-16. 1 file per lake.
/insects: data files containing mayfly count data from 2015 /ptct: csv of point count data from 2014-2016

scripts:

acoustic_effort.R: visualizes sampling effort of acoustic monitors
calculate_ACI_wavfile_SEKIClapp_V5.R: calculates Acoustic Complexity Index from wav files, adapted from NPS NSND
calculate_AI_NVSPL_V16c_mkc.R: adapted from NPS-NSNSD, calculates many acoustic indices from NVSPL files-- out put in /data/indices/2018_02_05
hide_filenames.R: renames files to hide identifying information in the filename-- DO NOT USE YET
index_explore_20180208.R: exploration of acoustic index data in data/indices/2018_02_05
mayflycode.R: explores mayfly count data from sticky traps
moch_pb.R: reads in a selection table created in Raven of the Mountain Chickadee playback conducted in 2014 at Center Basin
pointcount_explore.R: reads in point count data and explores patterns
sscape_airtemp.R: plots air temperature taken from SongMeters

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