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update tic templates and add update functionality
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^README_.*$ | ||
^README.Rmd$ | ||
^animation.gif$ | ||
^\.ccache$ | ||
^\.github$ |
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## tic GitHub Actions template: linux-macos-windows-deploy | ||
## revision date: 2020-05-20 | ||
on: | ||
push: | ||
pull_request: | ||
# for now, CRON jobs only run on the default branch of the repo (i.e. usually on master) | ||
schedule: | ||
# * is a special character in YAML so you have to quote this string | ||
- cron: "0 4 * * *" | ||
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name: R CMD Check via {tic} | ||
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jobs: | ||
R-CMD-check: | ||
runs-on: ${{ matrix.config.os }} | ||
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name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
# use a different tic template type if you do not want to build on all listed platforms | ||
- { os: windows-latest, r: "release" } | ||
- { os: macOS-latest, r: "release", pkgdown: "true" } | ||
- { os: macOS-latest, r: "devel" } | ||
- { os: ubuntu-latest, r: "release" } | ||
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env: | ||
# otherwise remotes::fun() errors cause the build to fail. Example: Unavailability of binaries | ||
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
CRAN: ${{ matrix.config.cran }} | ||
# we are not allowed to write to ~/.ccache on GH Actions | ||
# setting some ccache options | ||
CCACHE_BASEDIR: ${{ GITHUB.WORKSPACE }} | ||
CCACHE_DIR: ${{ GITHUB.WORKSPACE }}/.ccache | ||
CCACHE_NOHASHDIR: true | ||
CCACHE_SLOPPINESS: include_file_ctime | ||
# make sure to run `tic::use_ghactions_deploy()` to set up deployment | ||
TIC_DEPLOY_KEY: ${{ secrets.TIC_DEPLOY_KEY }} | ||
# prevent rgl issues because no X11 display is available | ||
RGL_USE_NULL: true | ||
# if you use bookdown or blogdown, replace "PKGDOWN" by the respective | ||
# capitalized term. This also might need to be done in tic.R | ||
BUILD_PKGDOWN: ${{ matrix.config.pkgdown }} | ||
# macOS >= 10.15.4 linking | ||
SDKROOT: /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk | ||
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steps: | ||
- uses: actions/[email protected] | ||
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- uses: r-lib/actions/setup-r@master | ||
with: | ||
r-version: ${{ matrix.config.r }} | ||
Ncpus: 4 | ||
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# LaTeX. Installation time: | ||
# Linux: ~ 1 min | ||
# macOS: ~ 1 min 30s | ||
# Windows: never finishes | ||
- uses: r-lib/actions/setup-tinytex@v1 | ||
if: runner.os != 'Windows' | ||
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- uses: r-lib/actions/setup-pandoc@master | ||
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# set date/week for use in cache creation | ||
# https://github.community/t5/GitHub-Actions/How-to-set-and-access-a-Workflow-variable/m-p/42970 | ||
# - cache R packages daily | ||
# - cache ccache weekly -> 'ccache' helps rebuilding the package cache faster | ||
- name: "[Cache] Prepare daily timestamp for cache" | ||
if: runner.os != 'Windows' | ||
id: date | ||
run: echo "::set-output name=date::$(date '+%d-%m')" | ||
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- name: "[Cache] Prepare weekly timestamp for cache" | ||
if: runner.os != 'Windows' | ||
id: datew | ||
run: echo "::set-output name=datew::$(date '+%Y-%V')" | ||
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- name: "[Cache] Cache R packages" | ||
if: runner.os != 'Windows' | ||
uses: pat-s/[email protected] | ||
with: | ||
path: ${{ env.R_LIBS_USER }} | ||
key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{steps.date.outputs.date}} | ||
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-${{steps.date.outputs.date}} | ||
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- name: "[Cache] Cache ccache" | ||
if: runner.os != 'Windows' | ||
uses: pat-s/[email protected] | ||
with: | ||
path: ${{ env.CCACHE_DIR}} | ||
key: ${{ runner.os }}-r-${{ matrix.config.r }}-ccache-${{steps.datew.outputs.datew}} | ||
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-ccache-${{steps.datew.outputs.datew}} | ||
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# install ccache and write config file | ||
- name: "[Linux] ccache" | ||
if: runner.os == 'Linux' | ||
run: | | ||
sudo apt install ccache libcurl4-openssl-dev | ||
mkdir -p ~/.R && echo -e 'CC=ccache gcc -std=gnu99\nCXX=ccache g++\nFC=ccache gfortran\nF77=ccache gfortran' > $HOME/.R/Makevars | ||
# install ccache and write config file | ||
# mirror the setup described in https://github.com/rmacoslib/r-macos-rtools | ||
- name: "[macOS] ccache" | ||
if: runner.os == 'macOS' && matrix.config.r == 'devel' | ||
run: | | ||
brew install ccache | ||
# install SDK 10.13 (High Sierra, used by CRAN) | ||
wget -nv https://github.com/phracker/MacOSX-SDKs/releases/download/10.15/MacOSX10.13.sdk.tar.xz | ||
tar fxz MacOSX10.13.sdk.tar.xz | ||
sudo mv MacOSX10.13.sdk /Library/Developer/CommandLineTools/SDKs/ | ||
rm -rf MacOSX10.13* | ||
# install gfortran 8.2 (used by CRAN) | ||
wget -nv https://github.com/fxcoudert/gfortran-for-macOS/releases/download/8.2/gfortran-8.2-Mojave.dmg | ||
sudo hdiutil attach gfortran*.dmg | ||
sudo installer -package /Volumes/gfortran*/gfortran*/gfortran*.pkg -target / | ||
sudo hdiutil detach /Volumes/gfortran-8.2-Mojave | ||
rm gfortran-8* | ||
# set compiler flags | ||
mkdir -p ~/.R && echo -e 'CC=ccache clang\nCPP=ccache clang\nCXX=ccache clang++\nCXX11=ccache clang++\nCXX14=ccache clang++\nCXX17=ccache clang++\nCFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.13.sdk\nCCFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.13.sdk\nCXXFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.13.sdk\nCPPFLAGS=-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.13.sdk -I/usr/local/include\nF77=ccache /usr/local/gfortran/bin/gfortran\nFC=ccache /usr/local/gfortran/bin/gfortran' > $HOME/.R/Makevars | ||
# for some strange Windows reason this step and the next one need to be decoupled | ||
- name: "[Stage] Prepare" | ||
run: | | ||
Rscript -e "if (!requireNamespace('remotes')) install.packages('remotes', type = 'source')" | ||
Rscript -e "if (getRversion() < '3.2' && !requireNamespace('curl')) install.packages('curl', type = 'source')" | ||
- name: "[Stage] Install" | ||
if: matrix.config.os != 'macOS-latest' || matrix.config.r != 'devel' | ||
run: Rscript -e "remotes::install_github('ropensci/tic')" -e "print(tic::dsl_load())" -e "tic::prepare_all_stages()" -e "tic::before_install()" -e "tic::install()" | ||
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# macOS devel needs its own stage because we need to work with an option to suppress the usage of binaries | ||
- name: "[Stage] Prepare & Install (macOS-devel)" | ||
if: matrix.config.os == 'macOS-latest' && matrix.config.r == 'devel' | ||
run: | | ||
echo -e 'options(Ncpus = 4, pkgType = "source", repos = structure(c(CRAN = "https://cloud.r-project.org/")))' > $HOME/.Rprofile | ||
Rscript -e "remotes::install_github('ropensci/tic')" -e "print(tic::dsl_load())" -e "tic::prepare_all_stages()" -e "tic::before_install()" -e "tic::install()" | ||
- name: "[Stage] Script" | ||
run: Rscript -e 'tic::script()' | ||
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- name: "[Stage] After Success" | ||
if: matrix.config.os == 'macOS-latest' && matrix.config.r == 'release' | ||
run: Rscript -e "tic::after_success()" | ||
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- name: "[Stage] Upload R CMD check artifacts" | ||
if: failure() | ||
uses: actions/upload-artifact@master | ||
with: | ||
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | ||
path: check | ||
- name: "[Stage] Before Deploy" | ||
run: | | ||
Rscript -e "tic::before_deploy()" | ||
- name: "[Stage] Deploy" | ||
run: Rscript -e "tic::deploy()" | ||
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- name: "[Stage] After Deploy" | ||
run: Rscript -e "tic::after_deploy()" |
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@@ -0,0 +1,48 @@ | ||
on: | ||
schedule: | ||
# * is a special character in YAML so you have to quote this string | ||
- cron: "0 4 * * *" | ||
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name: Update tic | ||
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jobs: | ||
update-tic: | ||
runs-on: ${{ matrix.config.os }} | ||
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name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
- { os: macOS-latest, r: "release" } | ||
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steps: | ||
- uses: actions/checkout@v2 | ||
with: | ||
persist-credentials: false | ||
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- uses: r-lib/actions/setup-r@master | ||
with: | ||
r-version: ${{ matrix.config.r }} | ||
Ncpus: 4 | ||
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- name: "[Stage] Dependencies" | ||
run: | | ||
brew install curl libsodium | ||
Rscript -e "if (!requireNamespace('remotes')) install.packages('remotes', type = 'source')" | ||
Rscript -e "remotes::install_github('ropensci/tic@update-yaml', dependencies = TRUE)" -e "print(tic::dsl_load())" -e "tic::prepare_all_stages()" -e "tic::before_install()" -e "tic::install()" | ||
- name: "[Stage] Update YAMLs" | ||
run: | | ||
Rscript -e "tic::update_yml()" | ||
- name: "[Stage] Create Pull Request" | ||
uses: peter-evans/create-pull-request@v2 | ||
with: | ||
token: ${{ secrets.TIC_UPDATE }} | ||
title: "Update tic templates" | ||
commit-message: "update tic templates" | ||
body: "{tic} templates can be updated :rocket: :robot:" | ||
branch: update-tic | ||
base: master |