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Check unit tests
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mobiusklein committed Jul 2, 2024
1 parent f810ed6 commit 4f0b847
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Showing 3 changed files with 13 additions and 8 deletions.
17 changes: 11 additions & 6 deletions src/ms_deisotope/data_source/thermo_raw.py
Original file line number Diff line number Diff line change
Expand Up @@ -539,12 +539,17 @@ def __len__(self):
return len(self.index)

def close(self):
"""Close the underlying file reader.
"""
if self._source is not None:
self._source.Close()
self._source = None
self._dispose()
"""Close the underlying file reader."""
try:
if self._source is not None:
self._source.Close()
self._source = None
except AttributeError:
pass
try:
self._dispose()
except AttributeError:
pass

def __del__(self):
self.close()
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2 changes: 1 addition & 1 deletion src/ms_deisotope/data_source/thermo_raw_net.py
Original file line number Diff line number Diff line change
Expand Up @@ -701,7 +701,7 @@ def _close_handle(self):
self._raw_source.Dispose()
except TypeError:
pass
except TypeError:
except (TypeError, AttributeError):
pass
self._raw_source = None

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2 changes: 1 addition & 1 deletion tests/test_scan_traits.py
Original file line number Diff line number Diff line change
Expand Up @@ -29,7 +29,7 @@ def test_traits(self):
assert scan_window == scan_event.total_scan_window()
assert scan_event == scan_event
assert acquisition == acquisition
assert scan.tic.raw() - 1.8161617e+10 + 104 == 0.0
assert (scan.tic.raw() - 1.8161617e+10) in (104, 0.0)
scan.pick_peaks()
assert abs(scan.tic.centroided() - 4531125399.828125) < 1e-3
assert abs(scan.tic() - 4531125399.828125) < 1e-3
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