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debug hanging with tmate
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wpbonelli committed Sep 21, 2023
1 parent 2cb3c5f commit bab0645
Showing 1 changed file with 180 additions and 177 deletions.
357 changes: 180 additions & 177 deletions .github/workflows/integration.yml
Original file line number Diff line number Diff line change
Expand Up @@ -15,122 +15,122 @@ on:
schedule:
- cron: '0 6 * * *' # run at 6 AM UTC every day
jobs:
test_modflow_meson:
name: Build modflow6 with meson
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ ubuntu-latest, macos-latest, windows-latest ]
env: [ pip, miniconda, micromamba ]
defaults:
run:
shell:
# necessary for miniconda and micromamba
# https://github.com/mamba-org/provision-with-micromamba#important
bash -l {0}
steps:

- name: Checkout action
uses: actions/checkout@v3

- name: Checkout modflow6
uses: actions/checkout@v3
with:
repository: MODFLOW-USGS/modflow6
path: modflow6

- name: Setup Python
if: matrix.env == 'pip'
uses: actions/setup-python@v4
with:
python-version: 3.9
cache: 'pip'

- name: Install Python dependencies
if: matrix.env == 'pip'
shell: bash
run: pip install -r test/requirements.txt

- name: Install miniconda environment
if: matrix.env == 'miniconda'
uses: conda-incubator/setup-miniconda@v2
with:
environment-file: modflow6/environment.yml

- name: Install micromamba environment
if: matrix.env == 'micromamba'
uses: mamba-org/provision-with-micromamba@main
with:
environment-file: modflow6/environment.yml
cache-downloads: true
cache-env: true

- name: Install ifort
uses: ./
with:
path: ${{ runner.os != 'Windows' && 'bin' || 'C:\Program Files (x86)\Intel\oneAPI' }}

- name: Build modflow6 (Linux & Mac)
if: runner.os != 'Windows' && matrix.env == 'pip'
working-directory: modflow6
shell: bash
run: |
meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
meson compile -v -C builddir
meson install -C builddir
- name: Build modflow6 (Linux & Mac)
if: runner.os != 'Windows' && matrix.env != 'pip'
working-directory: modflow6
run: |
meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
meson compile -v -C builddir
meson install -C builddir
- name: Add micromamba Scripts dir to path (Windows)
if: runner.os == 'Windows' && matrix.env == 'micromamba'
shell: pwsh
run: |
# adding micromamba scripts dir to system path
$mamba_bin = "C:\Users\runneradmin\micromamba-root\envs\modflow6\Scripts"
if (Test-Path $mamba_bin) {
echo "adding micromamba scripts dir to path: $mamba_bin"
echo $mamba_bin | Out-File -FilePath $env:GITHUB_PATH -Encoding utf8 -Append
}

- name: Build modflow6 (Windows bash)
if: runner.os == 'Windows'
continue-on-error: true
working-directory: modflow6
shell: bash -l {0}
run: |
meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
meson compile -v -C builddir
meson install -C builddir
- name: Show meson build log
run: cat modflow6/builddir/meson-logs/meson-log.txt

- name: Build modflow6 (Windows pwsh)
if: runner.os == 'Windows'
continue-on-error: true
working-directory: modflow6
shell: pwsh
run: |
meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin --wipe
meson compile -v -C builddir
meson install -C builddir
- name: Build modflow6 (Windows cmd)
if: runner.os == 'Windows'
working-directory: modflow6
shell: cmd /C call {0}
run: |
meson setup builddir -Ddebug=false --prefix=%CD% --libdir=bin --wipe
meson compile -v -C builddir
meson install -C builddir
# test_modflow_meson:
# name: Build modflow6 with meson
# runs-on: ${{ matrix.os }}
# strategy:
# fail-fast: false
# matrix:
# os: [ ubuntu-latest, macos-latest, windows-latest ]
# env: [ pip, miniconda, micromamba ]
# defaults:
# run:
# shell:
# # necessary for miniconda and micromamba
# # https://github.com/mamba-org/provision-with-micromamba#important
# bash -l {0}
# steps:

# - name: Checkout action
# uses: actions/checkout@v3

# - name: Checkout modflow6
# uses: actions/checkout@v3
# with:
# repository: MODFLOW-USGS/modflow6
# path: modflow6

# - name: Setup Python
# if: matrix.env == 'pip'
# uses: actions/setup-python@v4
# with:
# python-version: 3.9
# cache: 'pip'

# - name: Install Python dependencies
# if: matrix.env == 'pip'
# shell: bash
# run: pip install -r test/requirements.txt

# - name: Install miniconda environment
# if: matrix.env == 'miniconda'
# uses: conda-incubator/setup-miniconda@v2
# with:
# environment-file: modflow6/environment.yml

# - name: Install micromamba environment
# if: matrix.env == 'micromamba'
# uses: mamba-org/provision-with-micromamba@main
# with:
# environment-file: modflow6/environment.yml
# cache-downloads: true
# cache-env: true

# - name: Install ifort
# uses: ./
# with:
# path: ${{ runner.os != 'Windows' && 'bin' || 'C:\Program Files (x86)\Intel\oneAPI' }}

# - name: Build modflow6 (Linux & Mac)
# if: runner.os != 'Windows' && matrix.env == 'pip'
# working-directory: modflow6
# shell: bash
# run: |
# meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
# meson compile -v -C builddir
# meson install -C builddir

# - name: Build modflow6 (Linux & Mac)
# if: runner.os != 'Windows' && matrix.env != 'pip'
# working-directory: modflow6
# run: |
# meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
# meson compile -v -C builddir
# meson install -C builddir

# - name: Add micromamba Scripts dir to path (Windows)
# if: runner.os == 'Windows' && matrix.env == 'micromamba'
# shell: pwsh
# run: |
# # adding micromamba scripts dir to system path
# $mamba_bin = "C:\Users\runneradmin\micromamba-root\envs\modflow6\Scripts"
#
# if (Test-Path $mamba_bin) {
# echo "adding micromamba scripts dir to path: $mamba_bin"
# echo $mamba_bin | Out-File -FilePath $env:GITHUB_PATH -Encoding utf8 -Append
# }

# - name: Build modflow6 (Windows bash)
# if: runner.os == 'Windows'
# continue-on-error: true
# working-directory: modflow6
# shell: bash -l {0}
# run: |
# meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin
# meson compile -v -C builddir
# meson install -C builddir

# - name: Show meson build log
# run: cat modflow6/builddir/meson-logs/meson-log.txt

# - name: Build modflow6 (Windows pwsh)
# if: runner.os == 'Windows'
# continue-on-error: true
# working-directory: modflow6
# shell: pwsh
# run: |
# meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin --wipe
# meson compile -v -C builddir
# meson install -C builddir

# - name: Build modflow6 (Windows cmd)
# if: runner.os == 'Windows'
# working-directory: modflow6
# shell: cmd /C call {0}
# run: |
# meson setup builddir -Ddebug=false --prefix=%CD% --libdir=bin --wipe
# meson compile -v -C builddir
# meson install -C builddir

test_modflow_msvs:
name: Build modflow6 with MSVS
Expand Down Expand Up @@ -162,70 +162,73 @@ jobs:
with:
vs2019: 'true'

- name: Setup tmate session
uses: mxschmitt/action-tmate@v3

- name: Build modflow6
working-directory: modflow6/msvs
run: devenv mf6.sln /Build

- name: Show build log
shell: bash
run: cat "D:\a\modflow6\modflow6\modflow6\msvs\UpgradeLog.htm"

test_pymake:
name: Test pymake integration
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
# windows-2022 runners have Visual Studio 17.4.*, which oneapi toolchain doesn't support yet
os: [ ubuntu-latest, macos-latest, windows-2019 ]
defaults:
run:
shell: bash
steps:

- name: Checkout action
uses: actions/checkout@v3

- name: Checkout pymake
uses: actions/checkout@v3
with:
repository: modflowpy/pymake
path: pymake

- name: Setup Graphviz
if: runner.os == 'Linux'
uses: ts-graphviz/setup-graphviz@v1

- name: Set up Python
uses: actions/[email protected]
with:
python-version: 3.9

- name: Install Python packages
working-directory: pymake
run: .github/common/install-python.sh

- name: Setup oneAPI compilers
uses: ./
with:
path: ${{ runner.os != 'Windows' && 'bin' || 'C:\Program Files (x86)\Intel\oneAPI' }}

- name: Download examples
working-directory: pymake
run: .github/common/download-examples.sh

- name: Test (Linux)
if: runner.os == 'Linux'
working-directory: pymake
run: pytest -v -n=auto --dist=loadfile -m="base or regression" --durations=0 --cov=pymake --cov-report=xml autotest/

- name: Test (MacOS)
if: runner.os == 'macOS'
working-directory: pymake
run: pytest -v -n=auto --dist=loadfile -m="base" --durations=0 --cov=pymake --cov-report=xml autotest/

- name: Test (Windows)
if: runner.os == 'Windows'
working-directory: pymake
shell: cmd
run: pytest -v -m="base" --durations=0 --cov=pymake --cov-report=xml autotest/
run: cat "D:\a\install-intelfortran-action\install-intelfortran-action\modflow6\msvs\UpgradeLog.htm"

# test_pymake:
# name: Test pymake integration
# runs-on: ${{ matrix.os }}
# strategy:
# fail-fast: false
# matrix:
# # windows-2022 runners have Visual Studio 17.4.*, which oneapi toolchain doesn't support yet
# os: [ ubuntu-latest, macos-latest, windows-2019 ]
# defaults:
# run:
# shell: bash
# steps:

# - name: Checkout action
# uses: actions/checkout@v3

# - name: Checkout pymake
# uses: actions/checkout@v3
# with:
# repository: modflowpy/pymake
# path: pymake

# - name: Setup Graphviz
# if: runner.os == 'Linux'
# uses: ts-graphviz/setup-graphviz@v1

# - name: Set up Python
# uses: actions/[email protected]
# with:
# python-version: 3.9

# - name: Install Python packages
# working-directory: pymake
# run: .github/common/install-python.sh

# - name: Setup oneAPI compilers
# uses: ./
# with:
# path: ${{ runner.os != 'Windows' && 'bin' || 'C:\Program Files (x86)\Intel\oneAPI' }}

# - name: Download examples
# working-directory: pymake
# run: .github/common/download-examples.sh

# - name: Test (Linux)
# if: runner.os == 'Linux'
# working-directory: pymake
# run: pytest -v -n=auto --dist=loadfile -m="base or regression" --durations=0 --cov=pymake --cov-report=xml autotest/

# - name: Test (MacOS)
# if: runner.os == 'macOS'
# working-directory: pymake
# run: pytest -v -n=auto --dist=loadfile -m="base" --durations=0 --cov=pymake --cov-report=xml autotest/

# - name: Test (Windows)
# if: runner.os == 'Windows'
# working-directory: pymake
# shell: cmd
# run: pytest -v -m="base" --durations=0 --cov=pymake --cov-report=xml autotest/

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