cancer.yaml

pattern_name: cancer

pattern_iri: http://purl.obolibrary.org/obo/mondo/patterns/cancer.yaml

description: '

  Cancers are malignant neoplasms arising from a variety of different cell types.

  This is a design pattern for classes representing cancers based on their location.
  This may be the site of origin, but it can also represent a secondary site for metastatized
  cancer.

  We use the generic ''disease has location'' relation, which generalized over primary
  and secondary sites.'

contributors:
- https://orcid.org/0000-0002-6601-2165

classes:
  cancer: MONDO:0004992
  owl_thing: owl:Thing

relations:
  disease has location: RO:0004026

annotationProperties:
  exact_synonym: oio:hasExactSynonym
  related_synonym: oio:hasRelatedSynonym

vars:
  location: owl_thing

name:
  text: '%s cancer'
  vars:
  - location

annotations:
- annotationProperty: exact_synonym
  text: malignant %s neoplasm
  vars:
  - location
- annotationProperty: exact_synonym
  text: malignant neoplasm of %s
  vars:
  - location
- annotationProperty: exact_synonym
  text: cancer of %s
  vars:
  - location

def:
  text: A cancer involving a %s.
  vars:
  - location

equivalentTo:
  text: '''cancer'' and ''disease has location'' some %s'
  vars:
  - location