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NESTML Benchmark with MPI#1069

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Commits on Jun 25, 2024

• Initial commit for benchmark scripts with MPI

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Commits on Jul 8, 2024

• Modify script to add memory benchmark

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• add ISI plotting to benchmark script

  

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• Merge remote-tracking branch 'upstream/master' into nestml_benchmark

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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Commits on Jul 10, 2024

• add aeif_psc_alpha neuron model

  

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Commits on Jul 12, 2024

• Update benchmark scripts

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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• Update sbatch script

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Commits on Jul 15, 2024

• add N_rec_exc and N_rec_inh parameters

  

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• add debug print information

  

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• Add print statements

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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• add ISI plots script

  

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• Add short_sim command line arg

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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• adding better RNG seeding

  

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• add ISI plots script

  

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• add ISI plots script

  

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Commits on Jul 16, 2024

• fix isi plotting script

  

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• Update iterations for short simulations

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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Commits on Jul 21, 2024

• update aeif_psc_alpha neuron to eliminate kernels and convolutions

  

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Commits on Jul 24, 2024

• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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Commits on Jul 25, 2024

• merge benchmarking across threads and across compute nodes in benchmarking script

  

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Commits on Jul 28, 2024

• merge benchmarking across threads and across compute nodes in benchmarking script

  

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Commits on Jul 29, 2024

• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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• merge benchmarking across threads and across compute nodes in benchmarking script

  

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Commits on Aug 1, 2024

• merge benchmarking across threads and across compute nodes in benchmarking script

  

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Commits on Aug 6, 2024

• Merge remote-tracking branch 'upstream/master' into nestml_benchmark

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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Commits on Aug 13, 2024

• disable minor ticks on x-axis

  

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• fix axis labels for threads run

  

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Commits on Aug 15, 2024

• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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Commits on Aug 16, 2024

• make plot styles consistent

  

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• make plot styles consistent

  

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• make plot styles consistent

  

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

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Commits on Aug 20, 2024

• ISI plots for MPI runs

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• update benchmark plots

  

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Commits on Aug 23, 2024

• update benchmark plots

  

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Commits on Aug 25, 2024

• plot runtime data log-log

  

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Commits on Sep 4, 2024

• Modify the path of benchmark.py in the template

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• add K-S distance metric

  

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• add K-S distance metric

  

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Commits on Sep 5, 2024

• update plots

  

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Commits on Sep 9, 2024

• add KS statistic to benchmarking script

  

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

  

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• updates to memory plots

  

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• updates to memory plots

  

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Commits on Sep 10, 2024

• fix plotting in brunel script

  

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Commits on Sep 11, 2024

• plotting updates in benchmark script

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Commits on Sep 12, 2024

• plotting updates in benchmark script

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• make all benchmarking panels part of the same figure

  

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Commits on Sep 13, 2024

• Peformance benchmark changes

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• make all benchmarking panels part of the same figures

  

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• Merge remote-tracking branch 'origin/nestml_benchmark' into nestml_benchmark

  

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• make all benchmarking panels part of the same figures

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• make all benchmarking panels part of the same figures

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Commits on Sep 18, 2024

• fix memory plot

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• fix plots vertical axes

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Commits on Sep 19, 2024

• add column labels to performance plot

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• fix plotting order

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