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Increase memory and use sort in bedtool_genomecov process when dealing with merged replicates #567

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Increase memory and use sort in bedtool_genomecov process when dealing with merged replicates

Increase memory and use sort in bedtool_genomecov process when dealing with merged replicates #567

Run time

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Job Run time
Run pipeline with test data and controls
21m 40s
Run pipeline with test data (23.04.0)
26m 26s
Test workflow parameters (--skip_trimming)
20m 1s
Run pipeline with test data (latest-everything)
25m 6s
Test workflow parameters (--skip_merge_replicates)
20m 14s
Test workflow parameters (--skip_consensus_peaks)
20m 56s
Test workflow parameters (--aligner bowtie2)
22m 14s
Test workflow parameters (--aligner chromap)
20m 51s
Test workflow parameters (--aligner star)
21m 30s
3h 18m 58s