Merge pull request #368 from JoseEspinosa/fixes

Fix save_unaligned parameter description in schema

CHANGELOG.md

@@ -10,6 +10,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 - [[#327](https://github.com/nf-core/atacseq/issues/327)] - Consistently support `.csi` indices as alternative to `.bai` to allow SAMTOOLS_INDEX to be used with the `-c` flag.
 - [[#356](https://github.com/nf-core/atacseq/issues/356)] - Get rid of the `lib` folder and rearrange the pipeline accordingly.
 - Updated pipeline template to [nf-core/tools 2.13.1](https://github.com/nf-core/tools/releases/tag/2.13.1)
+- Updated pipeline template to [nf-core/tools 2.14.1](https://github.com/nf-core/tools/releases/tag/2.14.1)
+- [[#359](https://github.com/nf-core/atacseq/issues/359)] - Fix `--save_unaligned` description in schema.
 
 ## [[2.1.2](https://github.com/nf-core/atacseq/releases/tag/2.1.2)] - 2022-08-07
 

nextflow_schema.json

@@ -306,7 +306,7 @@
                 "save_unaligned": {
                     "type": "boolean",
                     "fa_icon": "fas fa-save",
-                    "description": "Where possible, save unaligned reads from either STAR, HISAT2 or Salmon to the results directory.",
+                    "description": "Save unaligned sequences to the output directory (only available for Bowtie 2 And STAR",
                     "help_text": "This may either be in the form of FastQ or BAM files depending on the options available for that particular tool."
                 },
                 "bamtools_filter_pe_config": {