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Add module dragonflye for long-reads assembly #104

Merged
merged 13 commits into from
Nov 2, 2023
Merged

Add module dragonflye for long-reads assembly #104

merged 13 commits into from
Nov 2, 2023

Commits on Oct 27, 2023

  1. add nfcore module dragonfyle

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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  2. create test for assembly with dragonflye

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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  3. tmp fix for handling gzip/no-gzip assemblies

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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  4. add genome_size value in the input file to meta map

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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  5. add genome_size value to ext.args in dragonflye

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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  6. add dragonfly documentation plus fixme message in workflow

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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  7. fix prettier

    @Daniel-VM
    Daniel-VM committed Oct 27, 2023
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Commits on Oct 28, 2023

  1. fix processing of gziped assemblies for gene annotation

    @Daniel-VM
    Daniel-VM committed Oct 28, 2023
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Commits on Oct 30, 2023

  1. fix ext.args and update help text on dragonflye module

    @Daniel-VM
    Daniel-VM committed Oct 30, 2023
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  2. Merge branch 'module_dragonflye' into dev

    @Daniel-VM
    Daniel-VM committed Oct 30, 2023
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  3. update changelog nf-core#104

    @Daniel-VM
    Daniel-VM committed Oct 30, 2023
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Commits on Oct 31, 2023

  1. fix condition to parse gsize in dragonflye module conf

    @Daniel-VM
    Daniel-VM committed Oct 31, 2023
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Commits on Nov 2, 2023

  1. applied reviewer suggestions nf-core#104

    @Daniel-VM
    Daniel-VM committed Nov 2, 2023
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