UTD Chores #763
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UTD Chores #763
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edmundmiller
commented
Sep 29, 2024
edmundmiller
commented
- Requests 28.GB of memory(https://community.seqera.io/t/slurm-node-overhead/437?u=emiller)
- Removes setting the tmp directory variable because it upsets MultiQC.
Technically we could probably get away with 30 on Genomics, but some of
the nodes in the normal queue have 28.GB so that's why jobs fail unexpectedly.
sinfo --format "%.10P %.10l %.6D %.6m %N"
PARTITION TIMELIMIT NODES MEMORY NODELIST
debug 2:00:00 2 32106 compute-7-6-[0-1]
normal* 4-00:00:00 110 28076+ compute-1-8-[0-19],compute-7-2-[20-39],compute-7-3-[8-39],compute-7-6-[2-39]
genomics 7-00:00:00 16 32106 compute-7-2-[0-15]
128s 4-00:00:00 8 128000 compute-2-6-[16-23]
256i 4-00:00:00 16 220000 compute-1-1-[0-15]
256h 4-00:00:00 10 256000 compute-2-6-[1-10]
Kim 7-00:00:00 1 128000 compute-2-4-0
Causing MultiQC to fail MultiQC/MultiQC#1356
jfy133
approved these changes
Sep 30, 2024
pontus
approved these changes
Sep 30, 2024
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