Fix the input so that all processes run

nf-core · Sep 6, 2024 · 516ff4c · 516ff4c
1 parent e5467c9
commit 516ff4c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/subworkflows/local/utils_nfcore_crisprseq_pipeline/main.nf b/subworkflows/local/utils_nfcore_crisprseq_pipeline/main.nf
@@ -169,8 +169,8 @@ workflow INITIALISATION_CHANNEL_CREATION_SCREENING {
     }
 
 
-    ch_biogrid = Channel.fromPath("$projectDir/assets/biogrid_hgncid_noduplicate_dropna.csv", checkIfExists: true)
-    ch_hgnc = Channel.fromPath("$projectDir/assets/hgnc_complete_set.txt", checkIfExists: true)
+    ch_biogrid = Channel.fromPath("$projectDir/assets/biogrid_hgncid_noduplicate_dropna.csv", checkIfExists: true).first()
+    ch_hgnc = Channel.fromPath("$projectDir/assets/hgnc_complete_set.txt", checkIfExists: true).first()
 
     if(params.mle_control_sgrna) {
         ch_mle_control_sgrna = Channel.fromPath(params.mle_control_sgrna)