Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Conda lock files #5827

Open
wants to merge 17 commits into
base: master
Choose a base branch
from
Open

Conda lock files #5827

wants to merge 17 commits into from

Commits on Aug 9, 2024

  1. ci(#2193): Add condalock file generation 

    https://github.com/seqeralabs/wave-cli?tab=readme-ov-file#build-a-container-by-using-a-conda-lock-file
    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    dbad13e View commit details
    Browse the repository at this point in the history

  2. ci: Add write permissions

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    6ea762d View commit details
    Browse the repository at this point in the history

  3. ci: Add gh pr checkout

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    b740f85 View commit details
    Browse the repository at this point in the history

  4. ci: Try a pre-canned action

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    95ba6cc View commit details
    Browse the repository at this point in the history

  5. ci: Cut out conda-lock-refresh 

    Couldn't get it to commit
    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    07a250e View commit details
    Browse the repository at this point in the history

  6. ci: Use plain GITHUB_TOKEN secret

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    b3ef764 View commit details
    Browse the repository at this point in the history

  7. ci: Skip committing

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    98cbce3 View commit details
    Browse the repository at this point in the history

  8. ci: Use Commit step from prettier linting 

    https://github.com/nf-core/modules/blob/90b1d1bd7f9474e173abd9e4082dedb559c7542a/.github/workflows/fix-linting.yml#L62-L71

Co-authored-by: mashehu <[email protected]>
    @edmundmiller @mashehu
    edmundmiller and mashehu committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    253a398 View commit details
    Browse the repository at this point in the history

  9. ci: Try actions/checkout#719

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    f085cc1 View commit details
    Browse the repository at this point in the history

  10. ci: Clean up commit message

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    fe828fa View commit details
    Browse the repository at this point in the history

  11. ci: Output lock file to the directory

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    8433c87 View commit details
    Browse the repository at this point in the history

  12. chore: Update an environment file for testing

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    a9f4d26 View commit details
    Browse the repository at this point in the history

  13. [automated] autogenerated conda-lock file

    @nf-core-bot @edmundmiller
    nf-core-bot authored and edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    22c4985 View commit details
    Browse the repository at this point in the history

  14. ci: Clean up the matrix to avoid a race condition

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    3afecb6 View commit details
    Browse the repository at this point in the history

  15. style: Ignore conda-lock for prettier

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    c6b7ae6 View commit details
    Browse the repository at this point in the history

  16. ci: Allow no conda-lock updates

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    251b8ca View commit details
    Browse the repository at this point in the history

  17. build: Try a conda-lock file

    @edmundmiller
    edmundmiller committed Aug 9, 2024
    Configuration menu
    Copy the full SHA
    de2fdf7 View commit details
    Browse the repository at this point in the history