Removed extra space

nschcolnicov · web-flow · commit 16055ad4f987 · 2024-02-23T18:05:42.000-03:00
diff --git a/subworkflows/local/bam_variant_calling_somatic_controlfreec/main.nf b/subworkflows/local/bam_variant_calling_somatic_controlfreec/main.nf
@@ -42,7 +42,7 @@ workflow BAM_VARIANT_CALLING_SOMATIC_CONTROLFREEC {
     .map{ meta, ratio ->
         def tumor_file = ratio instanceof List ? ratio.find { it.toString().endsWith("gz_ratio.txt") } : ratio //same here as cnv
         if (!tumor_file){
-            error ("Ratio tumor file not found for sample $meta.id")
+            error("Ratio tumor file not found for sample $meta.id")
         }
         [meta,tumor_file]
     }

Original file line number	Diff line number	Diff line change
`@@ -42,7 +42,7 @@ workflow BAM_VARIANT_CALLING_SOMATIC_CONTROLFREEC {`
`42`	`42`	`.map{ meta, ratio ->`
`43`	`43`	`def tumor_file = ratio instanceof List ? ratio.find { it.toString().endsWith("gz_ratio.txt") } : ratio //same here as cnv`
`44`	`44`	`if (!tumor_file){`
`45`		`- error ("Ratio tumor file not found for sample $meta.id")`
	`45`	`+ error("Ratio tumor file not found for sample $meta.id")`
`46`	`46`	`}`
`47`	`47`	`[meta,tumor_file]`
`48`	`48`	`}`