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adding fastqc trimmed in report #388

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wants to merge 13 commits into from
Closed

adding fastqc trimmed in report #388

wants to merge 13 commits into from

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Joon-Klaps
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github-actions bot commented Aug 1, 2023

This PR is against the master branch ❌

  • Do not close this PR
  • Click Edit and change the base to dev
  • This CI test will remain failed until you push a new commit

Hi @Joon-Klaps,

It looks like this pull-request is has been made against the Joon-Klaps/viralrecon master branch.
The master branch on nf-core repositories should always contain code from the latest release.
Because of this, PRs to master are only allowed if they come from the Joon-Klaps/viralrecon dev branch.

You do not need to close this PR, you can change the target branch to dev by clicking the "Edit" button at the top of this page.
Note that even after this, the test will continue to show as failing until you push a new commit.

Thanks again for your contribution!

@Joon-Klaps Joon-Klaps closed this Aug 1, 2023
@Joon-Klaps Joon-Klaps deleted the umitools branch August 1, 2023 14:59
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github-actions bot commented Aug 16, 2023 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 31da843

+| ✅ 148 tests passed       |+
#| ❔   4 tests were ignored |#
!| ❗   4 tests had warnings |!

❗ Test warnings:

  • files_exist - File not found: assets/multiqc_config.yml
  • files_exist - File not found: conf/igenomes.config
  • files_exist - File not found: lib/WorkflowViralrecon.groovy
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your prefered methods description, e.g. add publication citation for this pipeline

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.7.2
  • Run at 2023-08-01 15:01:44

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@Joon-Klaps @drpatelh @Klaps-bot