Forgot to delete debugging line

global.json

@@ -1,5 +1,5 @@
 {
-    "VERSION": "1.0.2",
+    "VERSION": "1.0.3",
     "CONFIG_KEYS": ["Contact Network", "Transmission Network", "Sample Times", "Viral Phylogeny (Transmissions)", "Viral Phylogeny (Seeds)", "Mutation Rates", "Ancestral Sequence", "Sequence Evolution"],
     "DESC": {
         "Contact Network": "The <b style='color:red;'>Contact Network</b> graph model describes all social interactions:<ul><li>Nodes represent individuals in the population</li><li>Edges represent all interactions across which the pathogen can transmit</li><li>Currently, FAVITES-Lite only supports static (i.e., unchanging) contact networks</li></ul>",

plugins/mutation_rates/common_treeswift.py

@@ -216,7 +216,6 @@ def treeswift_truncnorm(params, out_fn, config, GLOBAL, verbose=True):
     tree = read_tree_newick(out_fn['viral_phylogeny_time'])
     nodes = [node for node in tree.traverse_preorder() if node.edge_length is not None]
     rates = truncnorm_rvs(loc=mu, scale=sigma, a_min=a_min, b_max=b_max, size=len(nodes))
-    print('\n'.join(str(r) for r in rates)); exit() # TODO
     for i in range(len(nodes)):
         nodes[i].edge_length *= rates[i]
     tree.write_tree_newick(out_fn['viral_phylogeny_mut'])