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Issues list

Automatically generate a "Data" (image acquisition) boilerplate
#415 opened Jun 29, 2018 by oesteban 1.4.0
11
Pre-run freesurfer folder needs to be writable ? lts
#794 opened Apr 5, 2023 by ins0mniac2 1.3.x (fMRIPrep 20.2.x)
9
Improve robustness of brain extraction pipeline enhancement
#734 opened Jul 19, 2022 by jrdalenberg
8
Consider replacing WEBP compression with guetzli effort:medium Estimated medium effort task impact:low Estimated low impact task plotting
#142 opened Mar 18, 2017 by chrisgorgo
6
Distinguish between surface and volume spaces in Reference enhancement
#881 opened Jul 23, 2024 by tsalo
1
4
Synchronous temporal filter workflow effort:high Estimated high effort task impact:high Estimated high impact task
#311 opened Feb 14, 2019 by rciric
4
Add additional coregistration step for subcortical regions effort:high Estimated high effort task enhancement impact:medium Estimated medium impact task
#145 opened Mar 24, 2017 by chrisgorgo
4
Alternative gradient non-linearity distortion correction workflow / interface enhancement
#894 opened Oct 22, 2024 by Lestropie
3
Handle file read/write race in parallel computing effort:high Estimated high effort task enhancement impact:low Estimated low impact task
#856 opened Feb 27, 2024 by psychelzh
3
Excessive padding when resampling zooms
#696 opened Mar 17, 2022 by mgxd
3
Consider renaming StructuralReference interface discussion question
#612 opened Feb 5, 2021 by oesteban
3
Extract and save niworkflows-boldref brain-extract outputs effort:low Estimated low effort task impact:low Estimated low impact task
#579 opened Nov 6, 2020 by mgxd
3
Propagate TR from BIDS structure to NIfTI dims BIDS & Derivatives effort:low Estimated low effort task impact:medium Estimated medium impact task
#515 opened May 7, 2020 by oesteban 1.4.0
3
JS based scrolling through volumes effort:medium Estimated medium effort task enhancement impact:high Estimated high impact task plotting
#252 opened Sep 11, 2018 by chrisgorgo
3
Support nativemax and nativemin as space resolutions enhancement
#889 opened Aug 12, 2024 by tsalo
2
Detailed brain extraction reports
#648 opened Aug 16, 2021 by effigies
2
Possible to change FD "threshold" in .html for QA purposes? effort:medium Estimated medium effort task help wanted impact:medium Estimated medium impact task plotting
#633 opened Mar 5, 2021 by ryanw412
2
Improvements to the plots showing confound correlation effort:medium Estimated medium effort task help wanted impact:medium Estimated medium impact task plotting reports
#564 opened Sep 8, 2020 by oesteban
6 tasks
1.4.0
2
Atropos single-threaded?
#537 opened Jun 7, 2020 by effigies 1.4.0
2
Improve look and feel of fMRIPlot effort:medium Estimated medium effort task impact:low Estimated low impact task plotting
#237 opened May 11, 2018 by oesteban
2 tasks
2
Animations are CPU intensive effort:high Estimated high effort task impact:high Estimated high impact task plotting
#213 opened Dec 13, 2017 by chrisgorgo
2
Fill-in AFNI skull-stripping mask effort:medium Estimated medium effort task enhancement impact:low Estimated low impact task
#194 opened Aug 10, 2017 by effigies 1.4.0
2
brain_extraction_wf.inu_n4_final can be affected by extreme values bug
#928 opened Mar 1, 2025 by effigies
1
Missing metadata for res and den outputs BIDS & Derivatives
#752 opened Oct 13, 2022 by rwblair
1
1
Add test_masks back into CI
#671 opened Nov 16, 2021 by mgxd
@effigies
1
ProTip! What’s not been updated in a month: updated:<2025-02-10.