Add L4 IT #233
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Add L4 IT #233
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Fixes #226 Note given the rest of IT aren't species restricted, I opted to make this species agnostic too
shawntanzk
commented
Feb 16, 2022
src/ontology/bdso-edit.owl
Outdated
| SubClassOf(<http://purl.obolibrary.org/obo/CL_4023119> <http://purl.obolibrary.org/obo/PCL_1000002>) | ||
| SubClassOf(<http://purl.obolibrary.org/obo/CL_4023119> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000053> <http://purl.obolibrary.org/obo/PATO_0070002>)) | ||
| AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:33184512") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PCL_1000000> "An intratelencephalic-projecting glutamatergic neuron that is located in the boundary between L2/3 and L5 of the primary motor cortex. These cells have diverse morphologies with some pyramidal and some stellate cells.") | ||
| AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/PCL_1000000> <http://orcid.org/0000-0001-7258-9596>) |
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this should be dc:contributor
shawntanzk
commented
Feb 16, 2022
src/ontology/bdso-edit.owl
Outdated
| AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:33184512") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/PCL_1000000> "An intratelencephalic-projecting glutamatergic neuron that is located in the boundary between L2/3 and L5 of the primary motor cortex. These cells have diverse morphologies with some pyramidal and some stellate cells.") | ||
| AnnotationAssertion(dce:creator <http://purl.obolibrary.org/obo/PCL_1000000> <http://orcid.org/0000-0001-7258-9596>) | ||
| AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/PCL_1000000> "ILX:0770172") | ||
| AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:25525751") rdfs:comment <http://purl.obolibrary.org/obo/PCL_1000000> "These cells likely corresponded to the quasi-L4 neurons described previously in the motor cortex.") |
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explain l4 issue here
shawntanzk
commented
Feb 16, 2022
src/ontology/bdso-edit.owl
Outdated
| AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <http://purl.obolibrary.org/obo/PCL_1000000> "ILX:0770172") | ||
| AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "PMID:25525751") rdfs:comment <http://purl.obolibrary.org/obo/PCL_1000000> "These cells likely corresponded to the quasi-L4 neurons described previously in the motor cortex.") | ||
| AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/PCL_1000000> "L4 intratelencephalic projecting glutamatergic neuron of the primary motor cortex") | ||
| EquivalentClasses(<http://purl.obolibrary.org/obo/PCL_1000000> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CL_4023040> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002100> <http://purl.obolibrary.org/obo/UBERON_0001384>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002100> <http://purl.obolibrary.org/obo/UBERON_0005393>))) |
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equiv class is wrong
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Fixes #226
Note given the rest of IT aren't species restricted, I opted to make this species agnostic too