Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

added some sparql queries #276

Merged
merged 2 commits into from
Mar 21, 2022
Merged

added some sparql queries #276

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
8ff2f46
added some sparql queries
shawntanzk Mar 18, 2022
58e8fd2
Create pcl_cluster.sparql
shawntanzk Mar 18, 2022
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
10 changes: 10 additions & 0 deletions src/sparql/pcl-celltypes-count.sparql
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX CL: <http://purl.obolibrary.org/obo/CL_>

SELECT (COUNT (DISTINCT ?term) as ?pclcells)
WHERE {
?term a owl:Class .
?term rdfs:subClassOf* CL:0000003
FILTER(isIRI(?term) && (STRSTARTS(str(?term), "http://purl.obolibrary.org/obo/PCL_")))
}
9 changes: 9 additions & 0 deletions src/sparql/pcl_cluster.sparql
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,9 @@
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX pcl: <http://purl.obolibrary.org/obo/PCL_>

SELECT (COUNT (DISTINCT ?ind) as ?indcount)
WHERE {
?ind a owl:NamedIndividual ;
pcl:0010059 ?cluster.
FILTER(isIRI(?ind) && (STRSTARTS(str(?ind), "http://purl.obolibrary.org/obo/PCL_")))
}
10 changes: 10 additions & 0 deletions src/sparql/pcl_individual.sparql
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,10 @@
PREFIX owl: <http://www.w3.org/2002/07/owl#>

SELECT (COUNT (DISTINCT ?ind) as ?indcount)
WHERE {
?ind a owl:NamedIndividual .
{ ?s3 ?p3 ?ind. }
UNION
{ ?ind ?p4 ?o4 . }
FILTER(isIRI(?ind) && (STRSTARTS(str(?ind), "http://purl.obolibrary.org/obo/PCL_")))
}