Let users edit run.sbatch and copy Slurm .out/.err back - #96
Open
kirillmitrofanov wants to merge 2 commits into
Open
Let users edit run.sbatch and copy Slurm .out/.err back#96kirillmitrofanov wants to merge 2 commits into
kirillmitrofanov wants to merge 2 commits into
Conversation
added 2 commits
September 10, 2026 00:04
Cluster jobs were submitting an unseen generated script and leaving slurm-*.out/.err on the compute server (including failed jobs). Prepare a draft in the project tree, pin log paths after edits, and rsync logs on COMPLETED and FAILED so the Runs panel and Jupyter can open them.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
run.sbatchincodes/projects/<id>/batch/<run_id>/so it can be edited in the modal or in Jupyter beforesbatch.slurm-*.out/.errplus Pythonstdout.log/stderr.logare copied intobatch/<run_id>/logs/and listed in the Runs panel (failed jobs are why.errexists).#SBATCH --chdir/--output/--errorare pinned to the remote run dir after any edit so copy-back can find the files. Independent of Add internal vs hackathon Jupyter spaces #88–Feat/schema improvements and optimization #95.Test plan
codes/projects/<id>/batch/<run_id>/..err(not onlyresults/on COMPLETED)./assets/index-CbQzE8nY.js).sbatch.