739: add h_simulations_output_format

[ClaraBeckBayer]

Pull Request

Part of #671

Fixes sub issue #739

[github-actions]

Code Coverage Summary

Filename                    Stmts    Miss  Cover    Missing
------------------------  -------  ------  -------  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R/checkmate.R                  73       1  98.63%   72
R/crmPack-package.R             4       0  100.00%
R/CrmPackClass-methods.R        5       0  100.00%
R/Data-class.R                147       5  96.60%   43, 564-565, 571-576
R/Data-methods.R              203       0  100.00%
R/Data-validity.R             144       1  99.31%   21
R/Design-class.R              321       0  100.00%
R/Design-methods.R           2812     784  72.12%   149-153, 169-176, 636-640, 664-667, 675-694, 699-728, 732-733, 735, 750-758, 762, 774-793, 1195-1199, 1326, 1340-1344, 1406, 1596, 1813, 1840-1843, 1852-1863, 1867-1886, 1897-1901, 1907-1919, 2182, 2207-2210, 2217-2228, 2232-2251, 2263-2267, 2273-2285, 2569-2572, 2600-2603, 2611-2623, 2626-2637, 2641-2677, 2694-2703, 2709-2724, 2749, 2790-2791, 3054-3524, 3619-3630, 3633-3644, 3648-3684, 3701-3710, 3718-3733, 3771, 3813-3814, 4093, 4095-4096, 4155, 4191, 4228-4231, 4250-4254, 4315-4322, 4350-4354, 4362-4380, 4406-4425, 4428, 4461, 4483-4501, 4737, 4832
R/Design-validity.R            28       0  100.00%
R/fromQuantiles.R             176      67  61.93%   238-378
R/helpers_broom.R              74      10  86.49%   30, 34-35, 37-38, 40, 81, 102-104
R/helpers_covr.R               23       0  100.00%
R/helpers_data.R               96       1  98.96%   139
R/helpers_design.R            105      35  66.67%   77-129
R/helpers_jags.R               77       0  100.00%
R/helpers_model.R              85       4  95.29%   38, 89-90, 139
R/helpers_rules.R             428       0  100.00%
R/helpers_samples.R             5       0  100.00%
R/helpers_simulations.R        27       0  100.00%
R/helpers.R                   214      61  71.50%   107-127, 162-178, 200-304, 339-353
R/logger.R                     11       0  100.00%
R/mcmc.R                      290      18  93.79%   92-97, 376-377, 387, 389-390, 393-396, 579-580, 669, 675, 733
R/McmcOptions-class.R          22       0  100.00%
R/McmcOptions-methods.R         8       1  87.50%   43
R/McmcOptions-validity.R       42       0  100.00%
R/Model-class.R              1062     166  84.37%   145-147, 216-218, 222-224, 283-285, 357-359, 363-365, 444-446, 513-515, 577-581, 584-587, 690-693, 697-698, 813-817, 937-939, 943-951, 1096-1098, 1103-1106, 1110-1113, 1229-1233, 1235-1238, 1242-1245, 1248, 1409-1419, 1424-1430, 1585-1588, 1594-1601, 1758, 1767, 1776, 1785, 1794-1799, 1935, 1944, 1953, 1961-1963, 2807-2836, 2840-2846, 2853-2857, 2862, 2969-2982, 3008, 3104-3106, 3110, 3203-3205, 3209, 3278-3290, 3308, 3368-3370, 3372-3373, 3376-3381
R/Model-methods.R             472      38  91.95%   78, 233-238, 809-854, 1175-1184
R/Model-validity.R            443      16  96.39%   430-433, 442-445, 596-604
R/ModelParams-class.R          17       0  100.00%
R/ModelParams-validity.R       21       0  100.00%
R/Rules-class.R               458       0  100.00%
R/Rules-methods.R            1536     184  88.02%   889, 892, 895, 1010, 1013, 1016, 1136-1139, 1173, 1276-1279, 1314, 2582-2590, 2614-2621, 2784-2793, 3073-3082, 3215-3458, 3727, 3731, 3776, 3780
R/Rules-validity.R            448      30  93.30%   684-723
R/Samples-class.R               6       0  100.00%
R/Samples-methods.R          1188      21  98.23%   410-420, 648, 1665-1666, 1698, 1711, 1893, 2223-2228
R/Samples-validity.R           10       0  100.00%
R/Simulations-class.R         200       5  97.50%   776-779, 1035
R/Simulations-methods.R      1617    1473  8.91%    65-350, 406, 416-435, 448-453, 500-509, 675-2970
R/Simulations-validity.R       75      75  0.00%    20-168
R/utils.R                       6       0  100.00%
TOTAL                       12979    2996  76.92%

Diff against main

Filename                   Stmts    Miss  Cover
-----------------------  -------  ------  --------
R/Design-methods.R           +25      +5  +0.07%
R/helpers_design.R           +23       0  +9.35%
R/helpers_simulations.R       +9       0  +100.00%
R/helpers.R                  -10       0  -1.27%
R/Simulations-class.R         +1       0  +0.01%
R/Simulations-methods.R      +13     +13  -0.07%
TOTAL                        +61     +18  -0.03%

Results for commit: 518057d

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

[github-actions]

Unit Test Performance Difference

Test Suite	$Status$	Time on main	$±Time$	$±Tests$	$±Skipped$	$±Failures$	$±Errors$
CrmPackClass-class	💔	$24.41$	$+1.02$	$0$	$0$	$0$	$0$
CrmPackClass-methods	💔	$30.60$	$+25.52$	$+96$	$0$	$0$	$0$
Rules-methods	💚	$50.47$	$-1.61$	$0$	$-1$	$0$	$0$

Additional test case details

Test Suite	$Status$	Time on main	$±Time$	Test Case
CrmPackClass-class	💔	$24.27$	$+1.02$	CrmPackClass_correctly_identifies_crmPack_classes
CrmPackClass-methods	💚	$30.60$	$-6.46$	tidy_methods_exist_for_all_relevant_classes
CrmPackClass-methods	👶		$+31.98$	tidy_methods_return_non_empty_value_for_all_classes
helpers-simulations	👶		$+0.01$	aggregation_of_additional_stats_works_correctly
helpers_design	👶		$+0.02$	h_simulations_output_format_returns_object_as_expected

Results for commit ef44e88

♻️ This comment has been updated with latest results.

[github-actions]

Unit Tests Summary

       1 files       39 suites   3m 45s ⏱️
1 263 tests 1 109 ✔️ 154 💤 0 ❌
6 814 runs  6 622 ✔️ 192 💤 0 ❌

Results for commit 518057d.

♻️ This comment has been updated with latest results.

[danielinteractive]

Thanks @ClaraBeckBayer and @robertadamsbayer , looks good, can then remove commented code