Repositories list

• DeepGP

  Public
  Python

  •

  BSD 2-Clause "Simplified" License

  •1•7•0•0•Updated Jun 17, 2024Jun 17, 2024

• MonoMS1

  Public
  Python

  •0•0•0•0•Updated May 24, 2024May 24, 2024

• GproDIA

  Public
  Data-independent acquisition glycoproteomics with comprehensive statistical control.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•2•1•0•Updated Feb 20, 2024Feb 20, 2024

• DeepFLR

  Public
  GitHub Desktop tutorial repository

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Mar 28, 2023Mar 28, 2023

• metaproteomics-utilities

  Public
  Scripts for metaproteomics data analysis and visualization.

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Jan 25, 2023Jan 25, 2023

• phosphoRS-cli

  Public
  A command line interface of phosphoRS (version 3.1).

  C#

  •1•1•0•1•Updated Dec 8, 2022Dec 8, 2022

• DeepDIA

  Public
  Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •16•41•5•0•Updated Oct 23, 2022Oct 23, 2022

• DeepMS2-phospho

  Public
  Generate in silico spectral libraries of phosphopeptides and performing spectral matching for phosphorylation site localization.

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •2•2•0•0•Updated Jan 4, 2021Jan 4, 2021

• BacteriaMS-difference

  Public
  Differential protein analysis of MALDI-TOF mass spectra of bacteria.

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •0•3•0•0•Updated May 25, 2020May 25, 2020

• BacteriaMS-mixture

  Public
  MALDI-MS based bacterial mixture identification.

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •0•2•0•0•Updated May 25, 2020May 25, 2020

• BacteriaMS

  Public
  MALDI-MS based bacterial typing.

  R

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated May 25, 2020May 25, 2020