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    11 repositories

    • nemabiome

      Public
      Nemabiome website
      HTML
      •2•1•1•0•Updated May 9, 2024May 9, 2024

    • RAD_Haemonchus

      Public
      Genome-wide sequencing data to identify regions of the genome of the parasitic nematode Haemonchus contortus showing signatures of selection after benzimidazole…
      R
      •0•0•0•0•Updated Jul 10, 2022Jul 10, 2022

    • event_detector

      Public
      R
      •0•0•0•0•Updated Oct 30, 2019Oct 30, 2019

    • markerDB

      Public
      Build sequence databases for commonly used marker genes :scroll:
      R
      •
      MIT License
      •4•4•2•0•Updated Jun 27, 2019Jun 27, 2019

    • nemabiomeR

      Public
      Helper functions to run the dada2 pipeline on nemabiome data
      R
      •
      Other
      •0•0•0•0•Updated Jun 6, 2019Jun 6, 2019

    • firefly

      Public
      16S amplicon data processing pipeline
      Python
      •0•1•0•0•Updated Apr 26, 2019Apr 26, 2019

    • DADA2-ITS2-Analysis

      Public
      R
      •1•1•0•0•Updated Nov 30, 2018Nov 30, 2018

    • synergy

      Public
      Synergy compute cluster info
      Shell
      •0•4•0•0•Updated Jan 17, 2018Jan 17, 2018

    • vmmp

      Public
      Vet Med Microbiome Pipeline
      Python
      •
      MIT License
      •1•3•0•0•Updated Sep 19, 2017Sep 19, 2017

    • microbiome_resources

      Public
      Good microbiome resources
      0•0•0•0•Updated Feb 2, 2017Feb 2, 2017

    • rbootcamp

      Public
      Materials for the R Bootcamp hosted by UCVM
      HTML
      •
      Creative Commons Attribution 4.0 International
      •4•0•0•0•Updated Jan 4, 2017Jan 4, 2017
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