Repositories list

• vcell-fvsolver

  Public
  VCell Finite Volume PDE solver

  C++

  •

  MIT License

  •0•0•0•2•Updated Mar 28, 2025Mar 28, 2025

• vcell

  Public
  Virtual Cell Framework

  simulationinstall4jvcell-clients+ 1vcell-server

  Java

  •

  Other

  •20•77•176•25•Updated Mar 27, 2025Mar 27, 2025

• CompCellBio

  Public
  HTML

  •1•0•0•0•Updated Mar 26, 2025Mar 26, 2025

• vcell-jsbml

  Public
  JSBML Fork For VCell

  Java

  •

  GNU Lesser General Public License v2.1

  •26•0•0•0•Updated Mar 25, 2025Mar 25, 2025

• pyvcell

  Public
  Python

  •

  MIT License

  •0•1•0•2•Updated Mar 25, 2025Mar 25, 2025

• libvcell

  Public
  Java

  •

  MIT License

  •0•1•0•0•Updated Mar 20, 2025Mar 20, 2025

• vcell-fiji

  Public
  A tool that loads VCell simulation results into ImageJ and performs statistical analysis.

  Java

  •

  MIT License

  •1•2•6•0•Updated Feb 7, 2025Feb 7, 2025

• modelbricks-webapp

  Public
  webapp for exploring public models

  Handlebars

  •5•0•0•2•Updated Feb 7, 2025Feb 7, 2025

• vcdb

  Public
  Shell

  •

  MIT License

  •0•3•12•0•Updated Jan 30, 2025Jan 30, 2025

• vcell-solvers

  Public
  Virtual Cell solvers

  virtual-cell-solvers

  C

  •6•6•6•0•Updated Nov 13, 2024Nov 13, 2024

• vcell-api-client

  Public
  Python client for VCell REST API

  Python

  •

  MIT License

  •0•0•0•0•Updated May 30, 2024May 30, 2024

• vcell-bioformats

  Public archive
  implementation of ImageDatasetService thrift interface (optionally used by VCell if separately installed)

  Java

  •0•2•0•0•Updated May 6, 2024May 6, 2024

• usermaterials

  Public
  MIT License

  •0•0•3•0•Updated Sep 13, 2022Sep 13, 2022

• vcellMichael

  Public archive
  Virtual Cell Framework

  Java

  •

  Other

  •20•0•0•0•Updated Jul 18, 2022Jul 18, 2022

• vcell_cli_utils

  Public
  Python

  •

  MIT License

  •1•0•0•0•Updated Jun 24, 2021Jun 24, 2021

• test_suite

  Public archive
  Python

  •

  MIT License

  •0•0•5•0•Updated Mar 15, 2021Mar 15, 2021

• Biosimulators_utils

  Public archive
  Utilities for building standardized command-line interfaces for biosimulation software packages

  Python

  •

  MIT License

  •6•0•0•0•Updated Jan 27, 2021Jan 27, 2021

• GoogleSummerOfCode

  Public
  Main documentation site for NRNB GSoC project ideas and resources

  48•0•1•0•Updated Feb 5, 2020Feb 5, 2020

• vcell-imagej-fret-app

  Public archive
  Virtual Cell integration for ImageJ ** MOVED: https://github.com/virtualcell/vcell

  Java

  •0•2•0•0•Updated Oct 20, 2017Oct 20, 2017