Eco-Metabolomics container containing R and packages used in Ecology and Metabolomics
This container bundles frequently used tools in Ecological Metabolomics.
This container also contains R scripts that are needed to run the Galaxy workflow for the Metabolights 520 study. The study is currently private and will be published once the paper has been submitted.
This container bundles frequently used tools in Ecological Metabolomics. The following R libraries are included in this container:
- RColorBrewer
- Hmisc
- gplots
- multcomp
- multtest (Bioconductor)
- rgl
- mixOmics
- vegan
- ape
- pvclust
- dendextend
- cba
- nlme
The Galaxy workflow for the Metabolights 520 study is currently work-in-progress.
- Processing LC/MS and GC/MS data
- Processing ecological data
- Multivariate statistics
- Multifactorial statistics
- Metabolomics / Untargeted
- Ecology
- MS / LC-MS
- MS / GC-MS
- Kristian Peters (IPB-Halle)
TODO: Study will be submitted to Nature Scientific Data.
TODO: Cite study which will be submitted to Nature Scientific Data.