E-Flux (combining Expression Data with Fluxes)

Package to run E-Flux on cobra models with provided transcriptomics expression data.

Getting Started 🏃

To get started run the following:

from eflux import eflux2

eflux2(cobra_model, transcriptomics)

Installation 🪛

The most recent code and data can be installed directly from GitHub with:

pip install git+https://github.com/pnnl-predictive-phenomics/eflux.git

License 📄

The code in this package is licensed under the BSD-2 License.

Contributing 👋

To contribute to this package, please reference CONTRIBUTING.md