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@populationgenomics

Centre for Population Genomics

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  1. talos talos Public

    Rare Disease variant reanalysis tool

    Python 8 5

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 7 1

  3. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 6

  5. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 4 1

  6. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

Repositories

Showing 10 of 79 repositories
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 8 MIT 5 13 4 Updated Apr 22, 2025
  • dragen_align_pa Public
    populationgenomics/dragen_align_pa’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 22, 2025
  • gnomad-deployments Public Forked from broadinstitute/gnomad-deployments

    kustomizations for current gnomad project kubernetes deployments

    populationgenomics/gnomad-deployments’s past year of commit activity
    Makefile 0 1 0 0 Updated Apr 22, 2025
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 3 MIT 2 43 22 Updated Apr 21, 2025
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 7 MIT 1 47 (1 issue needs help) 39 Updated Apr 21, 2025
  • analysis-runner Public
    populationgenomics/analysis-runner’s past year of commit activity
    Python 2 MIT 4 8 (2 issues need help) 5 Updated Apr 21, 2025
  • ourdna-browser-blog Public
    populationgenomics/ourdna-browser-blog’s past year of commit activity
    JavaScript 0 0 0 0 Updated Apr 17, 2025
  • cpg-flow-gatk-sv Public

    CPG-Flow implementation of the GATK-SV pipeline, deployed at the Centre for Population Genomics

    populationgenomics/cpg-flow-gatk-sv’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 17, 2025
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 2 0 10 Updated Apr 17, 2025
  • cpg-utils Public

    Library of convenience functions specific to the CPG

    populationgenomics/cpg-utils’s past year of commit activity
    Python 0 MIT 1 2 2 Updated Apr 17, 2025
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