Skip to content

Issues: prody/ProDy

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

68 Open 634 Closed
68 Open 634 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

How to select minus (-) residue number
#2021 opened Dec 25, 2024 by locitran
1
Problems reading .msaio on Mac
#2019 opened Dec 18, 2024 by karenjgonzalez
AttributeError: module 'prody.trajectory' has no attribute '_n_csets'
#2010 opened Dec 2, 2024 by rgumpper
1
Potential issue with conda package.
#2005 opened Nov 28, 2024 by vincrichard
4
Running InsTy in Parallel
#2002 opened Nov 23, 2024 by groponp
4
Error when import Insty
#2001 opened Nov 23, 2024 by groponp
1
Waters bridging between chains Feature request Adding a feature that does not yet exist.
#1987 opened Nov 7, 2024 by jamesmkrieger
1
Chain ID in parseMMCIF is corresponding to asym_id or auth_asym_id
#1985 opened Nov 4, 2024 by hnguyentt
1
Problem with calcADPAxes
#1975 opened Oct 15, 2024 by karolamik13
2
update clustenm for openmm 8
#1971 opened Oct 9, 2024 by jamesmkrieger
new cif fields (Annotation of Protein Modifications in the PDB)
#1970 opened Oct 9, 2024 by jamesmkrieger
ExtendModel Nodes and Atoms Incompatible
#1962 opened Sep 25, 2024 by rks5854
1
20
ImportError While Using the ProDy Interface in NMWizard
#1961 opened Sep 19, 2024 by DaddyDaddyFish
9
Pdb ligand format changes
#1957 opened Sep 18, 2024 by jamesmkrieger
findClusterCenters
#1951 opened Sep 11, 2024 by mmuratyas
15
searchPfam fails to parse XML
#1933 opened Aug 12, 2024 by NicholasMcCarthy
1
InSty: NameError: name 'Interactions' is not defined
#1932 opened Aug 7, 2024 by TangYiChing
@karolamik13
9
ImportError: druggability package was not found
#1917 opened Jul 19, 2024 by accibio
Ensemble superpose
#1912 opened Jul 12, 2024 by Yago52
@atbogetti @sahags
1
float division by zero exception raised if using prody_align with mmCIF files
#1905 opened Jun 26, 2024 by nbruciaferri
1
bad change to mmCIF chain vs segment?
#1902 opened Jun 4, 2024 by jamesmkrieger
How to set the path for ProDy in VMD
#1898 opened May 13, 2024 by kiran923
2
ADP axes has a problem too
#1873 opened Apr 17, 2024 by jamesmkrieger
addMissingAtoms PDBFixer fails with InSty/WatFinder tutorial file Bug A problem with the code.
#1866 opened Apr 16, 2024 by jamesmkrieger
6
add iterpose to catdcd Feature request Adding a feature that does not yet exist.
#1863 opened Apr 10, 2024 by jamesmkrieger
ProTip! Updated in the last three days: updated:>2024-12-23.