Code

Matrix-Free Linear Operator#423

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yguclu merged 111 commits intopyccel:develpyccel/psydac:develfrom campospinto:general_linear_operatorcampospinto/psydac_dev:general_linear_operatorCopy head branch name to clipboardAug 5, 2024

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Commits

Commits on Jul 14, 2023

• add non matching conforming projection operators

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• add some plotting utilities

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• make multipatch examples run

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Commits on Jul 17, 2023

• Use SymPDE development version from GitHub

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• allow for non-matching grids in postprocessing

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• add utils

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Commits on Jul 18, 2023

• adds non-matching domain utilities

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• adds curl-curl test case comparisson

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Commits on Jul 24, 2023

• small changes

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• Merge remote-tracking branch 'origin/devel' into non_matching_multipatch

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Commits on Jul 25, 2023

• Merge branch 'devel' into non_matching_multipatch

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Commits on Jul 27, 2023

• add time-domain Maxwell

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Commits on Jul 28, 2023

• add time harmonic and time domain maxwell examples

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Commits on Aug 2, 2023

• add new tests and last example

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Commits on Sep 20, 2023

• Merge branch 'devel' into non_matching_multipatch

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• make Codacy happy

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Commits on Nov 27, 2023

• add pml example

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• update non_matching operators and add proposal of tests

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• adapt files to new projection

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Commits on Nov 28, 2023

• make codacy happy

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Commits on Mar 1, 2024

• add some pml experiments

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• Merge branch 'devel' into non_matching_multipatch

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Commits on Mar 5, 2024

• add docs and readability

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• Merge branch 'devel' into non_matching_multipatch

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• move pml experiments to its own branch

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• adapt tests

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Commits on Mar 7, 2024

• change Hodge matrix naming conventions

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• Merge branch 'devel' into non_matching_multipatch

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Commits on Mar 19, 2024

• Merge branch 'devel' into non_matching_multipatch

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Commits on Apr 23, 2024

• Merge branch 'devel' into non_matching_multipatch

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Commits on May 8, 2024

• functions stencil index to petsc index and viceversa

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• efficient conversion to PETSc of StencilVectors

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Commits on May 13, 2024

• works for 1D stencil matrix with multiple processes

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Commits on May 15, 2024

• correct indexing for 2D stencilmatrix

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• works 1d,2d,3d stencilmatrix without periodic BC

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Commits on May 16, 2024

• efficient conversion of stencilmatrix to PETSc.Mat for 1,2,3D and periodic or not BC

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Commits on May 17, 2024

• Fixed conversion from 2D BlockStencilVector to Petsc.Vec

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• fix general case also for stencilvector 2D

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Commits on May 21, 2024

• fixed petsc_to_psydac for BlockVectors

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• PETSc conversion works for StencilVector and BlockStencilVector of 1 level

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• conversion works for StencilMatrix

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• works for BlockLinearOperators, the blocks of which are Stencilmatrices

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• Clean up, docstrings

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Commits on May 22, 2024

• fix bugs

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• sequential case, docstrings

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• cleaning

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• erase forgotten comments

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• Merge branch 'devel' into improve_mat_topetsc

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• adds revised Hcurl conforming projections and adapts the tests, prior review comments have been worked in

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• adapt conforming examples to new projections

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Commits on May 23, 2024

• update non-matching examples

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• fix loop stencil

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• work in comments

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• update tests

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• Merge branch 'devel' into non_matching_multipatch

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Commits on May 27, 2024

• forgotten prints

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Commits on May 29, 2024

• add pyccel kernel

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• string for type annotations

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• clean up plus fix serial case

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Commits on May 31, 2024

• stop using create_domain() -- wip

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Commits on Jun 2, 2024

• use Domain.join() to build non-matching domains

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Commits on Jun 3, 2024

• clean time measurements

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Commits on Jun 4, 2024

• using temp function for sympde Domain.join

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• adding ref

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Commits on Jun 7, 2024

• call exposed domain and codomain in linalg/basic.py

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Commits on Jun 10, 2024

• Merge example scripts and get rid of get_source_and_solution_OBSOLETE

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Commits on Jun 11, 2024

• clean up multipatch domain utilities

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• Coarsen test runs and add timedomain dummy run

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Commits on Jun 12, 2024

• Make codacy happy

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• fix typo

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• fix version 12 of macos in tests

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Commits on Jun 17, 2024

• Expose multipatch modules to docs

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• minor documentation related fixes

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Commits on Jun 18, 2024

• sphinx fix

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Commits on Jun 19, 2024

• Fixes for CI failures caused by new macOS runner version and numpy 2.0

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• CI: Temporarily disabled docs deployment since base repo is a fork

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Commits on Jun 20, 2024

• Merge pull request #3 from campospinto/ci-fixes-jun2024

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Commits on Jun 21, 2024

• Merge branch 'devel' into improve_mat_topetsc

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• Update macos version

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• Disable deploy_docs in documentation.yml

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• Merge branch 'ci-fixes-jun2024' into non_matching_multipatch

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• Merge pull request #4 from campospinto/ci-fixes-jun2024

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• Merge branch 'devel' into improve_mat_topetsc

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• simple implementation GeneralLinearOperator

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• Merge pull request #1 from campospinto/improve_mat_topetsc

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• Merge branch 'devel' into non_matching_multipatch

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• Merge pull request #5 from campospinto/non_matching_multipatch

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• Merge branch 'devel' into minor_bug_fix_linalg_basic

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• Merge branch 'devel' into general_linear_operator

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Commits on Jun 23, 2024

• general linear operator needs toarray, tosparse,transpose method

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• Merge pull request #2 from campospinto/minor_bug_fix_linalg_basic

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Commits on Jul 4, 2024

• improve docstrings

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• Merge branch 'devel' into general_linear_operator

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• fixed message notimplementederror

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• put import outside class

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Commits on Jul 8, 2024

• set tol to rtol in MINRES

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Commits on Jul 12, 2024

• add features and tests to MatrixFree linear ops

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• tests for matrix free linear ops

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Commits on Jul 16, 2024

• require scipy >= 1.14 in requirements.txt

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• discard tests with python3.8

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• avoid minres iteration if converged

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Commits on Aug 2, 2024

• Style cleanup of stencil2IJV_kernels.py

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• Apply some PEP8 recommendations to topetsc.py

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• Merge branch 'devel' into general_linear_operator

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• Revert "Disable deploy_docs in documentation.yml"

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• Revert "CI: Temporarily disabled docs deployment since base repo is a fork"

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• Require SciPy >= 1.12, hence Python >= 3.9

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• Do not skip tests with Python 3.9

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• Apply some PEP8 recommendations to linalg/basic.py

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Commits on Aug 5, 2024

• Add missing newline at end of file

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• Use master branch of Igakit once again

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