Allow OMPI as root in container #344
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| name: Cuda unit tests | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| python_version: | |
| required: false | |
| type: string | |
| ref: | |
| required: false | |
| type: string | |
| check_run_id: | |
| required: false | |
| type: string | |
| pr_repo: | |
| required: false | |
| type: string | |
| push: | |
| branches: [devel, main, cuda_nvc_test] | |
| env: | |
| COMMIT: ${{ inputs.ref || github.event.ref }} | |
| PEM: ${{ secrets.BOT_PEM }} | |
| GITHUB_RUN_ID: ${{ github.run_id }} | |
| GITHUB_CHECK_RUN_ID: ${{ inputs.check_run_id }} | |
| PR_REPO: ${{ inputs.pr_repo || github.repository }} | |
| jobs: | |
| Cuda: | |
| runs-on: ubuntu-24.04 | |
| name: Unit tests | |
| container: kitware/nvidia-nvhpc:24.9-devel-cuda_multi-ubuntu24.04 | |
| steps: | |
| - name: Prepare docker | |
| run: | | |
| echo "OMPI_ALLOW_RUN_AS_ROOT=1" >> $GITHUB_ENV | |
| echo "OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1" >> $GITHUB_ENV | |
| echo $LD_LIBRARY_PATH | |
| which mpicc | |
| mpicc -show | |
| mpirun --help | |
| mpirun | |
| echo "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/nvidia/hpc_sdk/Linux_x86_64/24.9/comm_libs/12.6/hpcx/hpcx-2.20/ompi/lib" >> $GITHUB_ENV | |
| apt-get update && apt-get install -y sudo | |
| TZ=Europe/France | |
| ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone | |
| DEBIAN_FRONTEND=noninteractive apt-get install -y --no-install-recommends tzdata | |
| sudo apt-get install -y git | |
| sudo chown -R $(whoami) /github/home | |
| shell: bash | |
| - uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ env.COMMIT }} | |
| repository: ${{ env.PR_REPO }} | |
| submodules: true | |
| - name: Install python (setup-python action doesn't work with containers) | |
| uses: ./.github/actions/python_install | |
| - name: "Setup" | |
| id: token | |
| run: | | |
| pip install jwt requests | |
| python ci_tools/setup_check_run.py cuda | |
| - name: CUDA Version | |
| run: | | |
| nvcc --version # cuda install check | |
| nvc --version # cuda install check | |
| - name: Install dependencies | |
| uses: ./.github/actions/linux_install | |
| - name: Install Pyccel with tests | |
| run: | | |
| # Ignore nvc switch errors | |
| export CFLAGS=-noswitcherror | |
| python -m pip install --upgrade pip | |
| python -m pip install .[test] | |
| shell: bash | |
| - name: Coverage install | |
| uses: ./.github/actions/coverage_install | |
| - name: Ccuda tests with pytest | |
| id: cuda_pytest | |
| uses: ./.github/actions/pytest_run_cuda | |
| - name: Collect coverage information | |
| continue-on-error: True | |
| uses: ./.github/actions/coverage_collection | |
| - name: Save code coverage report | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage-artifact | |
| path: .coverage | |
| retention-days: 1 | |
| include-hidden-files: true | |
| - name: "Post completed" | |
| if: always() | |
| run: | |
| python ci_tools/complete_check_run.py ${{ steps.cuda_pytest.outcome }} | |