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Add transforming adaptation with normalizing flows #154

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Add transforming adaptation with normalizing flows #154

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835febd
chore: Update dependencies
aseyboldt Oct 17, 2024
e336d67
style: Add some type hints
aseyboldt Oct 17, 2024
9d82b52
feat: Add transforming adaptation
aseyboldt Oct 17, 2024
4faf55f
docs: Add documentation template
aseyboldt Oct 17, 2024
7f14b8c
Clean up optimizer arguments
aseyboldt Oct 18, 2024
100fbef
Fix logdet sign
aseyboldt Oct 18, 2024
25246e9
chore: Update dependencies
aseyboldt Oct 25, 2024
799b8d4
Add transforming adaptation for stan
aseyboldt Oct 25, 2024
300c2db
feat: Add transformation file for normalizing flows
aseyboldt Nov 11, 2024
42374ea
chore: Update dependencies
aseyboldt Nov 14, 2024
ea15908
fix: Move mvscale import to be conditional
aseyboldt Nov 14, 2024
7b4dd2e
fix: Some rebase issues
aseyboldt Nov 14, 2024
6ec04e5
style: Fix ruff issues
aseyboldt Nov 14, 2024
2c29e11
feat: Add pixi config for development
aseyboldt Nov 14, 2024
2abcb05
Expose batch size
aseyboldt Nov 15, 2024
6f4c784
fix: Add lock around init_func
aseyboldt Nov 20, 2024
bbed638
Work on default normalizing flow
aseyboldt Nov 20, 2024
3439de8
Update deps
aseyboldt Nov 20, 2024
d6fda12
feat: Change default number of draws to None to let the sampler decide
aseyboldt Dec 12, 2024
e1acc6c
feat: allow dynamic extensions of normalizing flows
aseyboldt Dec 12, 2024
4797c04
chore: Adapt to new nuts-rs transform code
aseyboldt Dec 12, 2024
cf3e921
chore: update to pyo3 0.23
aseyboldt Dec 12, 2024
329a8b4
style: Reformat some code
aseyboldt Dec 12, 2024
fd57509
chore: improve gitignore
aseyboldt Dec 12, 2024
b020883
chore: Update pixi dependencies
aseyboldt Dec 12, 2024
9747722
chore: update nuts-rs
aseyboldt Dec 13, 2024
5707c03
chore: add items to gitignore
aseyboldt Dec 16, 2024
04af51c
chore: update bridgestan
aseyboldt Dec 16, 2024
9a1da91
fix: add lock for pymc init point func
aseyboldt Dec 16, 2024
086997a
chore: update dependencies
aseyboldt Dec 20, 2024
2a3ad45
chore: remove fluff from pyproject
aseyboldt Dec 20, 2024
ccfd9fe
feat: Add option to freeze pymc models
aseyboldt Dec 20, 2024
48f9019
style: Reformat some code
aseyboldt Dec 20, 2024
94c3e51
fix: Use arrow list with i64 offsets to store trace
aseyboldt Dec 20, 2024
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2 changes: 2 additions & 0 deletions .gitattributes
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Original file line number Diff line number Diff line change
@@ -0,0 +1,2 @@
# SCM syntax highlighting
pixi.lock linguist-language=YAML linguist-generated=true
5 changes: 5 additions & 0 deletions .gitignore
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Expand Up @@ -8,7 +8,12 @@ tvm_libs/*
notebooks/*.stan
notebooks/*.csv
notebooks/*.hpp
notebooks/radon*
perf.data*
wheels
.vscode/
*~
.zed
.cargo
*traces*
.pyrightconfig.json
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