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Add new example showing the use of get_sample_reduced_fundamental()
Signed-off-by: Håkon Wiik Ånes <[email protected]>
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examples/rotations/rotations_mapping_fundamental_sector.py
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""" | ||
================================================ | ||
Rotations mapping the fundamental sector on *S2* | ||
================================================ | ||
This example shows how to sample rotations :math:`\mathbf{R}` that when | ||
rotating the vector :math:`\mathbf{v_z} = (0, 0, 1)`, the resulting | ||
vectors cover the fundamental sector of a given Laue class. | ||
We show this by comparing the vectors we get by: | ||
1. sampling rotations for *4/mmm* and then rotating :math:`\mathbf{v_z}` | ||
2. sampling all of *S2* but only keeping those within the corresponding | ||
fundamental sector. | ||
Apart from the first rotation, all rotations have a Euler angle | ||
:math:`\phi = 0^{\circ}`. | ||
These "reduced" rotations are useful in template matching of spot | ||
patterns from the transmission electron microscope. | ||
""" | ||
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import matplotlib.pyplot as plt | ||
import numpy as np | ||
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from orix import plot, sampling | ||
from orix.quaternion import symmetry | ||
from orix.vector import Vector3d | ||
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# Sample rotations with an average misorientation | ||
res = 2 | ||
pg = symmetry.D4h # 4/mmm | ||
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R = sampling.get_sample_reduced_fundamental(res, point_group=pg) | ||
print(np.allclose(R.to_euler()[1:, 0], 0)) | ||
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######################################################################## | ||
# Get vectors within the fundamental sector following the two routes | ||
v1 = R * Vector3d.zvector() | ||
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v2 = sampling.sample_S2(res) | ||
v2 = v2[v2 <= pg.fundamental_sector] | ||
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# Only equivalent for the same S2 sampling method | ||
print(np.allclose(v1.data, v2.data)) | ||
print(v1) | ||
print(v2) | ||
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######################################################################## | ||
# Plot the vectors in the fundamental sector of 4/mmm | ||
fig, (ax0, ax1) = plt.subplots( | ||
ncols=2, subplot_kw={"projection": "ipf", "symmetry": pg}, layout="tight" | ||
) | ||
ax0.scatter(v1, s=5) | ||
ax1.scatter(v2, c="C1", s=5) | ||
ax0.set_title("Rotated Z vectors", loc="left") | ||
ax1.set_title("Directly sampled", loc="left") | ||
_ = fig.suptitle("Vectors in the fundamental sector of 4/mmm", y=0.8) |