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Improvement Description
The error model plots output by dada2 can be useful for diagnosing issues with the model. This is used in tandem with the denoising-stats output to evaluate outcomes, e.g., too many reads lost at the denoising stage could indicate a poor error model. The plots output by q2-dada2 should be included in the outputs of denoise-* to assist with troubleshooting.
Current Behavior
No error model information is output.
Proposed Behavior
Include error model plots from plotErrors() as a separate tab in the denoise-stats output.
The text was updated successfully, but these errors were encountered:
@gregcaporaso Yeah I am definitely interested! I am currently out of town until the end of the month, but then I should have a few weeks relatively free in early Aug where I can look into this. Does that work for a timeline on your end?
Improvement Description
The error model plots output by dada2 can be useful for diagnosing issues with the model. This is used in tandem with the denoising-stats output to evaluate outcomes, e.g., too many reads lost at the denoising stage could indicate a poor error model. The plots output by q2-dada2 should be included in the outputs of
denoise-*
to assist with troubleshooting.Current Behavior
No error model information is output.
Proposed Behavior
Include error model plots from
plotErrors()
as a separate tab in the denoise-stats output.The text was updated successfully, but these errors were encountered: