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Add full revdep check results
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8 changes: 2 additions & 6 deletions cran-comments.md
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The previous release had a major bug which effected a number of users, this release fixes that bug.

This release also changes the maintainer from Gábor Csárdi to Jim Hester.

## Test environments
* local OS X install, R 3.5.3
* ubuntu 14.04 (on travis-ci), R 3.5.3
* local OS X install, R 3.6.0
* ubuntu 14.04 (on travis-ci), R 3.6.0
* win-builder (devel and release)

## R CMD check results
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37 changes: 30 additions & 7 deletions revdep/README.md
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|collate |en_US.UTF-8 |
|ctype |en_US.UTF-8 |
|tz |America/New_York |
|date |2019-06-21 |
|date |2019-06-24 |

# Dependencies

|package |old |new |Δ |
|:-------|:-----|:----------|:--|
|remotes |2.0.4 |2.0.4.9000 |* |
|package |old |new |Δ |
|:-------|:-----|:-----|:--|
|remotes |2.0.4 |2.1.0 |* |

# Revdeps

## Failed to check (1)

|package |version |error |warning |note |
|:-------|:-------|:-----|:-------|:----|
|RxODE |0.9.0-8 |1 | |1 |
|package |version |error |warning |note |
|:--------------------------|:-------|:-----|:-------|:----|
|[RxODE](failures.md#rxode) |0.9.0-8 |1 | |1 |

## All (18)

|package |version |error |warning |note |
|:----------------------------------------|:-------|:-----|:-------|:----|
|automagic |0.5.1 | | | |
|[BiocManager](problems.md#biocmanager) |1.30.4 |1 | | |
|cyclocomp |1.1.0 | | | |
|devtools |2.0.2 | | | |
|[dynutils](problems.md#dynutils) |1.0.3 | | |1 |
|[icesTAF](problems.md#icestaf) |3.1-1 | | |1 |
|inlmisc |0.4.5 | | | |
|jetpack |0.4.2 | | | |
|librarian |1.7.0 | | | |
|[opencpu](problems.md#opencpu) |2.1.2 | | |1 |
|Orcs |1.2.0 | | | |
|pacman |0.5.1 | | | |
|[pct](problems.md#pct) |0.2.2 | | |1 |
|[reproducible](problems.md#reproducible) |0.2.8 |1 | | |
|[RxODE](failures.md#rxode) |0.9.0-8 |1 | |1 |
|[sapfluxnetr](problems.md#sapfluxnetr) |0.0.7 | | |1 |
|tinyProject |0.6.1 | | | |
|xfun |0.7 | | | |

254 changes: 253 additions & 1 deletion revdep/problems.md
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*Wow, no problems at all. :)*
# BiocManager

<details>

* Version: 1.30.4
* Source code: https://github.com/cran/BiocManager
* BugReports: https://github.com/Bioconductor/BiocManager/issues
* Date/Publication: 2018-11-13 08:40:10 UTC
* Number of recursive dependencies: 30

Run `revdep_details(,"BiocManager")` for more info

</details>

## In both

* checking tests ...
```
ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
>
> test_check("BiocManager")
── 1. Error: .version_validity('devel') works (@test_version.R#87) ────────────
non-character object(s)
1: expect_true(startsWith(.version_validity("devel"), test)) at testthat/test_version.R:87
2: quasi_label(enquo(object), label, arg = "object")
3: eval_bare(get_expr(quo), get_env(quo))
4: startsWith(.version_validity("devel"), test)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 78 SKIPPED: 2 WARNINGS: 1 FAILED: 1
1. Error: .version_validity('devel') works (@test_version.R#87)
Error: testthat unit tests failed
Execution halted
```
# dynutils
<details>
* Version: 1.0.3
* Source code: https://github.com/cran/dynutils
* URL: http://github.com/dynverse/dynutils
* BugReports: https://github.com/dynverse/dynutils/issues
* Date/Publication: 2019-05-02 12:10:03 UTC
* Number of recursive dependencies: 67
Run `revdep_details(,"dynutils")` for more info
</details>
## In both
* checking dependencies in R code ... NOTE
```
Namespace in Imports field not imported from: ‘desc’
All declared Imports should be used.
```
# icesTAF
<details>
* Version: 3.1-1
* Source code: https://github.com/cran/icesTAF
* URL: http://taf.ices.dk
* Date/Publication: 2019-05-24 16:11:33 UTC
* Number of recursive dependencies: 7
Run `revdep_details(,"icesTAF")` for more info
</details>
## In both
* checking Rd cross-references ... NOTE
```
Package unavailable to check Rd xrefs: ‘icesAdvice’
```
# opencpu
<details>
* Version: 2.1.2
* Source code: https://github.com/cran/opencpu
* URL: https://www.opencpu.org (website) https://github.com/opencpu/opencpu#readme (devel)
* BugReports: https://github.com/opencpu/opencpu/issues
* Date/Publication: 2019-05-12 17:10:10 UTC
* Number of recursive dependencies: 57
Run `revdep_details(,"opencpu")` for more info
</details>
## In both
* checking data for non-ASCII characters ... NOTE
```
Note: found 4 marked UTF-8 strings
```
# pct
<details>
* Version: 0.2.2
* Source code: https://github.com/cran/pct
* URL: https://itsleeds.github.io/pct/, https://github.com/ITSLeeds/pct
* BugReports: https://github.com/ITSLeeds/pct/issues
* Date/Publication: 2019-06-23 17:10:02 UTC
* Number of recursive dependencies: 105
Run `revdep_details(,"pct")` for more info
</details>
## In both
* checking data for non-ASCII characters ... NOTE
```
Note: found 11 marked UTF-8 strings
```
# reproducible
<details>
* Version: 0.2.8
* Source code: https://github.com/cran/reproducible
* URL: http://reproducible.predictiveecology.org, https://github.com/PredictiveEcology/reproducible
* BugReports: https://github.com/PredictiveEcology/reproducible/issues
* Date/Publication: 2019-03-18 18:20:03 UTC
* Number of recursive dependencies: 108
Run `revdep_details(,"reproducible")` for more info
</details>
## In both
* checking tests ...
```
ERROR
Running the tests in ‘tests/test-all.R’ failed.
Last 13 lines of output:
4 readRDS Whole Cache call 0.1675601006 secs
objectNames hashElements hash objSize
1 file file c92a272d3d3f3873 24110
2 .FUN .FUN 7a8f2865ef4bc06d 1256
functionName component elapsedTime units
1 readRDS Hashing 0.0008699894 secs
2 readRDS Loading from memoise version of repo 0.1873638630 secs
3 readRDS Whole Cache call 0.3113448620 secs
══ testthat results ═══════════════════════════════════════════════════════════
OK: 259 SKIPPED: 66 WARNINGS: 0 FAILED: 2
1. Failure: test asPath (@test-cache.R#402)
2. Failure: test asPath (@test-cache.R#414)
Error: testthat unit tests failed
Execution halted
```
# RxODE
<details>
* Version: 0.9.0-8
* Source code: https://github.com/cran/RxODE
* URL: https://nlmixrdevelopment.github.io/RxODE/
* BugReports: https://github.com/nlmixrdevelopment/RxODE/issues
* Date/Publication: 2019-06-21 08:20:35 UTC
* Number of recursive dependencies: 114
Run `revdep_details(,"RxODE")` for more info
</details>
## In both
* checking whether package ‘RxODE’ can be installed ... ERROR
```
Installation failed.
See ‘.../revdep/checks.noindex/RxODE/new/RxODE.Rcheck/00install.out’ for details.
```
* checking package dependencies ... NOTE
```
Package suggested but not available for checking: ‘installr’
```
## Installation
### Devel
```
* installing *source* package ‘RxODE’ ...
** package ‘RxODE’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... ccache /usr/local/Cellar/llvm/8.0.0/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... configure: error: in `.../revdep/checks.noindex/RxODE/new/RxODE.Rcheck/00_pkg_src/RxODE':
configure: error: cannot run C compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details
ERROR: configuration failed for package ‘RxODE’
* removing ‘.../revdep/checks.noindex/RxODE/new/RxODE.Rcheck/RxODE’

```
### CRAN
```
* installing *source* package ‘RxODE’ ...
** package ‘RxODE’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... ccache /usr/local/Cellar/llvm/8.0.0/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... configure: error: in `.../revdep/checks.noindex/RxODE/old/RxODE.Rcheck/00_pkg_src/RxODE':
configure: error: cannot run C compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details
ERROR: configuration failed for package ‘RxODE’
* removing ‘.../revdep/checks.noindex/RxODE/old/RxODE.Rcheck/RxODE’

```
# sapfluxnetr
<details>
* Version: 0.0.7
* Source code: https://github.com/cran/sapfluxnetr
* URL: https://github.com/sapfluxnet/sapfluxnetr
* BugReports: https://github.com/sapfluxnet/sapfluxnetr/issues
* Date/Publication: 2019-05-01 10:40:03 UTC
* Number of recursive dependencies: 96
Run `revdep_details(,"sapfluxnetr")` for more info
</details>
## In both
* checking data for non-ASCII characters ... NOTE
```
Note: found 4 marked UTF-8 strings
```

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