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1. fastStructure fastStructure Public

   A variational framework for inferring population structure from SNP genotype data.

   Python 133 51

2. msCentipede msCentipede Public

   A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.

   Python 25 6

3. riboHMM riboHMM Public

   A mixture of hidden Markov models to infer translated sequences using ribosome footprint profiling

   Python 8 2

4. OrbWeaver OrbWeaver Public

   A convolutional neural network for predicting chromatin accessibility in multiple cell types from DNA sequence

   Python 7 3

5. qtlBHM qtlBHM Public

   A Bayesian hierarchical model to identify causal variants associated with quantitative molecular traits

   Python 5 1

6. deep_learning_papers deep_learning_papers Public

   Forked from pimentel/deep_learning_papers

   A place to collect papers that are related to deep learning and computational biology

   2