reimandlab
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ActivePathways
ActivePathways PublicIntegrative pathway enrichment analysis of multivariate omics data
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ActiveDriverWGSR
ActiveDriverWGSR PublicActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
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lncRNAs_TCGA
lncRNAs_TCGA PublicCode I have used throughout my Masters analyzing TCGA clinical and RNA-Seq datasets to discover lncRNA prognostic markers
Repositories
- ActiveDriverWGSR Public
ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
- reimandlab.github.io Public
- PPI_network_based_gene_type_prediction_model Public
This is the repository for Reagan (Gen) LI's BCB430 summer project.
- ShinyActivePathways Public
A shiny web server that performs ActivePathways and display results in Enrichment map
- lncRNAs_TCGA Public
Code I have used throughout my Masters analyzing TCGA clinical and RNA-Seq datasets to discover lncRNA prognostic markers