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1. clustifyr clustifyr Public

   Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets

   R 103 14

2. valr valr Public

   Genome Interval Arithmetic in R

   R 87 24

3. djvdj djvdj Public

   An R package to analyze single-cell V(D)J data

   R 23 4

4. raer raer Public

   Characterize A-to-I RNA editing in bulk and single-cell RNA sequencing experiments

   R 7 2

5. ggtrace ggtrace Public

   ggplot2 geoms to outline groups of data points

   R 15 2

6. rhumba rhumba Public

   Snakemake pipelines for RNA sequencing data

   C 2 2