chore: refactor deduplicate_annotations function in main.nf

rnajena · Apr 9, 2024 · 236263d · 236263d
1 parent 2fc80c2
commit 236263d
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/main.nf b/main.nf
@@ -231,10 +231,10 @@ workflow {
 
     // Deduplicate annotations
     deduplicate_annotations_input_ch = merged_count_tables_all_ch // group_name, merged_count_table
-            .combine( mergeAnnotations.out.view() ) // merged_annotations
+            .combine( mergeAnnotations.out ) // merged_annotations
             .map( it -> [ it[0], it[2], it[3] ] ) // group name, count table, annotations
     deduplicate_annotations_input_ch.view()
-    deduplicateAnnotations(deduplicate_annotations_input_ch)
+    deduplicateAnnotations( deduplicate_annotations_input_ch )
 
     // Run differential analysis with DESeq2
     samples_input_ch = Channel