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docs: populate autodock_mock_imports with all modules #53

docs: populate autodock_mock_imports with all modules

docs: populate autodock_mock_imports with all modules #53

Workflow file for this run

name: tests
on:
push:
pull_request:
branches:
# only branches from forks which have the form 'user:branch-name'
- '**:**'
schedule:
- cron: '42 0 * * 0'
jobs:
run_tests:
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python: ["3.11", "3.12"]
options: [""]
include:
- os: macos-latest
python: "3.12"
- os: windows-latest
python: "3.12"
- os: ubuntu-latest
python: "3.12"
options: ["warnings"]
- os: ubuntu-latest
python: "3.12"
options: ["full"]
runs-on: ${{ matrix.os }}
env:
# set additional runtest options (--full, -W error)
test_options: ${{ contains(matrix.options, 'full') && '--full' || '' }} ${{ contains(matrix.options, 'warnings') && '-W error' || '' }}
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Setup conda
uses: conda-incubator/setup-miniconda@v3
with:
python-version: ${{ matrix.python }}
- name: install dependencies
run: |
pip install pytest pytest-cov rnajena-sugar tqdm
- name: print conda environment info
run: |
conda info -a
conda list
pip list
- name: install package
run: |
pip install -v --no-deps .
- name: run test suite
run: |
mkdir empty; cd empty
pytest ../anchorna/tests --cov anchorna --cov-report=xml:../coverage.xml ${{ env.test_options }}
- name: upload coverage
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }} # required
fail_ci_if_error: true