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@saalfeldlab

Saalfeld Lab

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  1. n5 n5 Public

    Not HDF5

    Java 176 22

  2. paintera paintera Public

    Java 102 17

  3. stitching-spark stitching-spark Public

    Reconstruct big images from overlapping tiled images on a Spark cluster.

    Java 35 10

  4. render render Public

    Render transformed image tiles

    Java 34 33

  5. bigwarp bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    Java 27 14

  6. n5-viewer n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    Java 19 11

Repositories

Showing 10 of 106 repositories
  • render Public

    Render transformed image tiles

    saalfeldlab/render’s past year of commit activity
    Java 34 GPL-2.0 33 29 3 Updated Feb 27, 2025
  • hot-knife Public
    saalfeldlab/hot-knife’s past year of commit activity
    Java 4 GPL-2.0 7 1 2 Updated Feb 26, 2025
  • paintera Public
    saalfeldlab/paintera’s past year of commit activity
    Java 102 GPL-2.0 17 72 (12 issues need help) 2 Updated Feb 25, 2025
  • paintera-conversion-helper Public

    Script to assist conversion of n5 datasets to paintera-friendly formats

    saalfeldlab/paintera-conversion-helper’s past year of commit activity
    Kotlin 1 4 10 1 Updated Feb 25, 2025
  • n5-spark Public

    Spark-driven processing utilities for N5 datasets.

    saalfeldlab/n5-spark’s past year of commit activity
    Java 3 BSD-2-Clause 7 7 0 Updated Feb 25, 2025
  • label-utilities-spark Public
    saalfeldlab/label-utilities-spark’s past year of commit activity
    Java 0 GPL-2.0 4 0 2 Updated Feb 25, 2025
  • n5-universe Public

    Functionality shared across all n5

    saalfeldlab/n5-universe’s past year of commit activity
    Java 1 BSD-2-Clause 5 6 2 Updated Feb 14, 2025
  • n5-ij Public

    ImageJ convenience layer for N5

    saalfeldlab/n5-ij’s past year of commit activity
    Java 16 BSD-2-Clause 12 25 (1 issue needs help) 1 Updated Feb 13, 2025
  • bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    saalfeldlab/bigwarp’s past year of commit activity
    Java 27 GPL-2.0 14 40 2 Updated Feb 11, 2025
  • n5 Public

    Not HDF5

    saalfeldlab/n5’s past year of commit activity
    Java 176 BSD-2-Clause 22 18 8 Updated Feb 5, 2025
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